Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00323 ATGTTTCAACAACAAAGAGCTCATAACTCGAGCTTGATGGAACCCACAAATGGAAGTAATGGTAACAGCAACAACTCGAATTCGGCCTCAAAGCAGAGACTACGATGGACAAACGACCTTCACGAAGGATTTGTCAATGCAGTGGTACAACTTGGAGGCCCAGATCGTGCTACACCAAAAGGTGTCCTTAGAGTAATGGGTGTTCAAGGTTTAACAATATACCATGTCAAAAGCCACCTGCAGAAATATCGACTCGCGAAATACGTTCCCGACTCCTCATCTAATGGGAAAAAGGCTGACAAGAAGGATTCTGGTGACATTCTATCAAATATTGATGGCTCATCGGGAATGCAAATCACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGGCTGCATGAACAATTAGAGGTCCAGAGACAGCTACAGTTACGGATTGAAGCTCAAGGCAAGTACCTAAAGAAGATAATTGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGCAGCTCCAGTTGCTTCTCCCTTATCAGCTCCTGTTTCTGGTGACAACTGCCCAGAAACTGATAAAAACGACCCGTCAACACCTGTACCCACATCCGAGTCTCCTCGCCAAGAGAAAGCATCAAAGGAATCTGCCCAAGCCAAGAGTATCTCTATTGATGATTCTTTTCCGTCTCATCACGAACCATTGACACCAGATTCCGGTTGCCATGGCTCCCTAGATGACAGCCCAAGGCCAGTGAAGAAGCCAAGGCAGTACAGGGATGGTGCATGTGCCAAATCAGAGATGATGCTTGCACATCAAAGACTAGAGTCGAAGTCTAAACTCCACTCCCAAGGAATCACGCCCCATTTCTCTAGCCAGGGAAACGATCGATCCTTTGTCTGGAATGTCAATTGGTGA 909 46.2 MFQQQRAHNSSLMEPTNGSNGNSNNSNSASKQRLRWTNDLHEGFVNAVVQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYVPDSSSNGKKADKKDSGDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSAAPVASPLSAPVSGDNCPETDKNDPSTPVPTSESPRQEKASKESAQAKSISIDDSFPSHHEPLTPDSGCHGSLDDSPRPVKKPRQYRDGACAKSEMMLAHQRLESKSKLHSQGITPHFSSQGNDRSFVWNVNW 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1630734 1633829 + Carg07903-RA Car07g00323 151557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00323 302 Pfam Myb-like DNA-binding domain 34 84 IPR001005 -
Car07g00323 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 88 IPR017930 -
Car07g00323 302 Coils Coil 120 140 - -
Car07g00323 302 MobiDBLite consensus disorder prediction 176 255 - -
Car07g00323 302 MobiDBLite consensus disorder prediction 1 32 - -
Car07g00323 302 MobiDBLite consensus disorder prediction 188 204 - -
Car07g00323 302 MobiDBLite consensus disorder prediction 90 113 - -
Car07g00323 302 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00049 Car-Chr6:343767 Car07g00323 Car-Chr7:1630734 4.65E-62 dispersed
Car07g00323 Car-Chr7:1630734 Car14g00428 Car-Chr14:2223767 1.77E-69 dispersed
Car07g00323 Car-Chr7:1630734 Car03g00568 Car-Chr3:5454291 1.73E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3819 PF00249 Myb_DNA-binding 1.80E-05 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00323 - - cmax:111478721 422.935