Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00353 ATGTTATCCAGCTTGATGAACCTTCTGAGGGCTTGCTGGTTGCCATCCTCGGACAATATCGTACACAGCAATTCGGATTCGGCAGGCCGTCGTGAAGGCCTACTATGGTACAAAGATCTTGGACATCACATGAATGGTGAATTTTCAATGGCTGTTGTCCAGGCTAATAACTTGCTTGAGGATCAGAGCCAGATTGAATCGGGTCCATTGAGCTTGCTCGAATCCGGGCCGTTTGGAACGTTTATTGGTGTCTATGATGGTCATGGTGGACCTGAAGCATCAAATTACATATATGACAATCTTTTCCAGCATTTGAAAAGGTTCACCACAGAACAACAATCGATGTCATCTGATGTGATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTTATTTCGTTAGTGGCTAAACAATGGCAGATGAATCCCCAAATTGCAGCTGTTGGTTCATGCTGTTTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAATCTTGGCGATTCCCGTGCTGTGCTGGGAAGGCTCGTTCAGGCGACCGAGGAGGTCGTTGCTGTTCAGCTATCAGCCGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCAGTCTTTGCACCCAGATGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAAGGCTTAATGCAGGTTTCCAGATCTATAGGCGACGCGTATCTAAAGAAGGCTGAATTCAACAGGGAGCCCTTGTATGCGAAGTTTAGGCTTCGCGAACCGTTCAATCGGCCAATATTGAGCTGTGAACCATCAATATCAATGCATGAACTTCGACCACAAGATCAATTCATCATATTTGCCTCTGATGGTCTGTGGGAGCACCTTAGCAATCAGCAGGCTGTGGATATTATTCGAACTCACCCACATCATGGAAGTGCTAAGAGATTGGTAAAAGCTGCTATGCAGGATGCAGCTAAGAAGCGAGAAATGCGATATTCAGATTTGAAGGACATCGACCGAGGTATCCGCCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTCGACTCGAATCTCGTGAGCAGAGCAAGCTCGGTCCGAGGCCCGACTACCTCTTTAAGAGGGAGGGGCGTTATCTTACCAAAAAAGTCTCTAGCTCTTTGTGCTCCACCTGCATAA 1179 46.14 MLSSLMNLLRACWLPSSDNIVHSNSDSAGRREGLLWYKDLGHHMNGEFSMAVVQANNLLEDQSQIESGPLSLLESGPFGTFIGVYDGHGGPEASNYIYDNLFQHLKRFTTEQQSMSSDVIKKAFQATEEGFISLVAKQWQMNPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLVQATEEVVAVQLSAEHNVSIEAVRREMQSLHPDDSHIVVLKHNVWRVKGLMQVSRSIGDAYLKKAEFNREPLYAKFRLREPFNRPILSCEPSISMHELRPQDQFIIFASDGLWEHLSNQQAVDIIRTHPHHGSAKRLVKAAMQDAAKKREMRYSDLKDIDRGIRRHFHDDITVIVVFLDSNLVSRASSVRGPTTSLRGRGVILPKKSLALCAPPA 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1775218 1777960 - Carg07933-RA Car07g00353 151587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00353 392 Pfam Protein phosphatase 2C 80 325 IPR001932 -
Car07g00353 392 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car07g00353 392 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00111 Car-Chr6:720813 Car07g00353 Car-Chr7:1775218 0 dispersed
Car07g00353 Car-Chr7:1775218 Car07g00667 Car-Chr7:3388579 0 dispersed
Car16g01184 Car-Chr16:10034965 Car07g00353 Car-Chr7:1775218 1.56E-119 wgd
Car20g00642 Car-Chr20:3616045 Car07g00353 Car-Chr7:1775218 0 wgd
Car03g00605 Car-Chr3:5617688 Car07g00353 Car-Chr7:1775218 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00353 K01102 - csv:101219696 702.205