Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00388 ATGAGGCTTCTTCTTGTGTTGTTCTTTGGGCTCCTGTTGTTTTCCGGTGGTTTCTCTTCCTCCGCCGCCGACATCAGGGCGGAGATTCAGGCATTGATGTCTTTTAAGCTTAACCTTCATGACCCTCTTGGTGCATTGACTGGGTGGGATTCTTCAACCCCTTTGGCGCCTTGTGACTGGAGAGGCGTTTTATGTGTCAATAATCGAGTCACTGATCTTCGTTTGCCTCGTCTTCAACTTTCCGGCCGGTTGACCGATCAGTTGGCTAATTTGCCGATGCTCCGGAAGTTGAGTATTCGATCTAATTTCTTCAATGGTACCATTCCCTCTTCTTTGTCCAAATGTGCGTTTCTACGTTCGATTTTCTTACAGTACAACTCGTTTTCCGGTGACCTTCCGGTGGAGTTTGGGAACTTAACCAATCTCCATATTCTCAACGTGGCGGCGAATCGTCTCTCCGGTGGAATTCCCGACGACCTTCCGAGCAGTCTAAAGTATCTCGATCTTTCGTCGAATGCATTCTCCGGTCAGATTCCGAGGAGCGTTGTGAATATGACGGAGCTTCAGGTTGTGAATCTCTCTTTCAATAGATTTGGCGGCGAGATTCCGGCGAGCTTTGGTGAGCTGCAGAAGCTTAAACATCTTTGGCTGGATCATAATGTTTTAGAAGGGACATTGCCTTCGGCTCTTGCGAATTGTTCTTCGCTTGTTCATTTGAGCGTTGAGGGAAATGCTCTTCAAGGCATAATCCCGACAGCCATCGGAGCTCTTCCGAATCTTCAAGCTATTTCGCTCTCGCAAAATAGTCTCACTGGTTCAGTTCCTTACTCTCTGTTTTGCAATGTGTCGTCTCATGCGCCGTCTCTTCGAATCGTTCAACTTGGATTTAATGCGTTCACGGATATTGTCAAACCTCCGACAGCGACATGTTTTAGTGTTCTACAGGTCCTTGATATCCAACACAATCAGATAAAGGGGGAATTCCCCTTGTGGTTAATGGGTATTCCGACATTGACAGTCTTGGATTTTTCTGTCAATAATCTCTCCGGCGAGATTCCTCCCGGAATTGGGAAACTCTCGGGATTACAAGAGCTTAAAATGGCTAACAATTCGTTCCACGGCGCGATTCCGTCGGAAATCAAGAACTGTACTTCGATTTCTGTTATTGATTTTGAAGGAAATCGTTTAACCGGAGAGATTCCGCCGTTTTTGGGTTACATGAGAGGTTTGAAACGATTATCTCTCGGAGGAAATAATTTCTCCGGTCAAGTTCCGGCCAGTTTGGGAAATCTTTTGGAGCTTGAAACCTTGAATTTAGCTGACAATGGCTTGAGTGGAACCCTTCCTCTTGAACAGCTAATGGGTCTTGGGAATTTAATGGCGATGGAGCTCGGCGGGAACGAATTTTCCGGCGAGGTTCCGATTGGTATTGGGAATCTCAGCCGTCTTGAGATTTTGAATCTCAGTGCTAATAGTTTTTCTGGGAAGATTCCGTCCAGTCTTGGCAGTCTCTTCAAGCTAACCACCTTGGATTTGAGCAAACAGAATCTCTCCGGCGAGCTGCCGTTTGAGCTCTCTGGTTTGCCTAATTTACAGGTGATTGCTCTACAAGAGAACAAGCTATCTGGGAAAGTTCCTGATGGATTCAGTAGTTTAATGGGTTTGCGGTATCTGAATCTAAGCTCTAATGGATTTTCCGGCGAAATCCCTTCAAATTATGGGTTTCTCCGATCACTTGTTTCACTGTCGTTGTCGAAAAATCACATTTCTGGGTCGATCCCTTCAGAGCTGGGGAACTGCTCTGTTCTAGAACATCTGGAGGTCCGTTCAAATGCTCTTTCCGGCGATATTCCGGCGGATATTTCTCGTTTATTTCATCTACAAGAGCTCGATTTGGGTGGAAATAATTTAACTGGCGAAATCCCTGAAGAGATCTCTCGTTGCTCGTCTTTAAAATCGCTCCTTCTCGACTCGAATCATCTCTCTGGTAGCATACCAGAGTCGTTATCGGAGCTCTTGAACTTAACCGAGCTCGACCTCTCATCCAACCATTTGAGTGGCGTTATTCCTCTTAATCTTAGCTCAATTACTGGATTAGTGAGGCTAAACGTCTCGAGTAATGATCTTGAAGGCGAAATCCCAGCTGGTTTAGGCTCTAGATTCAATAACTCAGCTGTGTTTGCTAATAATTCCAAGCTTTGTGGGAAACCATTGGCTTGGAATTGTAAGGATACAAAGAAAAAAGATAGAACAAAGAGATTGATATTATTCATAGCAGTGGCCGCCAGTGGAGCTTGTCTTTTGGCTTTGTGTTGCTGCTTTTACATTTTCAGCTTGTTGCGATGGCGGAAGAGGCTGAAAGAGAGGGCGTCCGGCGAGAAGAAAACAAGCCCAGCAAGGGTTAGCTCAGCGGCAAGTGGCGGCCGTGGAAGCACAGAAAATGGAGGGCCAAAGCTTGTGATGTTCAACAACAAGATCACTCTAGCCGAAACAATTGAAGCAACAAGGCAATTCGATGAAGAAAATGTTCTAAGCAGGACACGTTATGGGTTAGTTTTCAAAGCTTGTTACAACGACGGCATGGTTCTTTCAATCCGCCGCCTCTCAAACGGTTCATTAGACGAAAACATGTTCAGAAAAGAAGCTGAATCATTGGGGAAAGTCAGGCACCGGAATTTGACTGTTCTTCGTGGCTACTACGCTGGCCCTCCTGACATGCGCCTATTAGTATACGATTACATGCCTAATGGCAACCTCGCCACTCTGCTTCAGGAAGCATCGCACCAAGATGGGCATGTTTTGAATTGGCCAATGCGGCATCTAATTGCTTTAGGCATCGCCCGTGGCTTAGCCTTTCTCCATTCCTCATCCATTATACATGGAGATGTCAAGCCACAAAGTGTTCTTTTCGACGCTGATTTCGAAGCTCATTTGTCGGATTTCGGGCTCGATCGACTAACCATTGCTGCTGCTGAAGCTTCCACATCTAGCTTGGTGGGTACTTTGGGGTACATTGCACCAGAAGCTGTGTTGACAGGGGAGGCCACGAAGGAATCGGATGTCTATAGCTTTGGCATTGTGTTGCTTGAGATTCTAACGGGGAAGAAGCCAGTGATGTTCACGGATGATGAAGATATTGTCAAGTGGGTGAAAAAGCAATTGCAAAGAGGCCAAATTACCGAGCTTTTAGAGCCTGGCTTGCTCGAGCTGGACCCTGAATCCTCTGAATGGGAAGAGTTTTTGCTTGGTGTGAAAGTTGGATTACTTTGCACTGCACCCGATCCTCGCGATCGACCAGCCATGTCGGATATCGTTTTCATGCTCGAAGGATGTCGTGTTGGACCCGACATCCCTTCCTCTGCTGATCCCACCTCCCAACCGTCACCAGCGTAA 3393 46.42 MRLLLVLFFGLLLFSGGFSSSAADIRAEIQALMSFKLNLHDPLGALTGWDSSTPLAPCDWRGVLCVNNRVTDLRLPRLQLSGRLTDQLANLPMLRKLSIRSNFFNGTIPSSLSKCAFLRSIFLQYNSFSGDLPVEFGNLTNLHILNVAANRLSGGIPDDLPSSLKYLDLSSNAFSGQIPRSVVNMTELQVVNLSFNRFGGEIPASFGELQKLKHLWLDHNVLEGTLPSALANCSSLVHLSVEGNALQGIIPTAIGALPNLQAISLSQNSLTGSVPYSLFCNVSSHAPSLRIVQLGFNAFTDIVKPPTATCFSVLQVLDIQHNQIKGEFPLWLMGIPTLTVLDFSVNNLSGEIPPGIGKLSGLQELKMANNSFHGAIPSEIKNCTSISVIDFEGNRLTGEIPPFLGYMRGLKRLSLGGNNFSGQVPASLGNLLELETLNLADNGLSGTLPLEQLMGLGNLMAMELGGNEFSGEVPIGIGNLSRLEILNLSANSFSGKIPSSLGSLFKLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGKVPDGFSSLMGLRYLNLSSNGFSGEIPSNYGFLRSLVSLSLSKNHISGSIPSELGNCSVLEHLEVRSNALSGDIPADISRLFHLQELDLGGNNLTGEIPEEISRCSSLKSLLLDSNHLSGSIPESLSELLNLTELDLSSNHLSGVIPLNLSSITGLVRLNVSSNDLEGEIPAGLGSRFNNSAVFANNSKLCGKPLAWNCKDTKKKDRTKRLILFIAVAASGACLLALCCCFYIFSLLRWRKRLKERASGEKKTSPARVSSAASGGRGSTENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTIAAAEASTSSLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTDDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPAMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1963440 1966832 - Carg07968-RA Car07g00388 151622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00388 1130 Pfam Leucine Rich repeat 674 687 IPR001611 GO:0005515
Car07g00388 1130 Pfam Leucine Rich repeat 625 640 IPR001611 GO:0005515
Car07g00388 1130 Pfam Protein kinase domain 848 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00388 1130 MobiDBLite consensus disorder prediction 791 818 - -
Car07g00388 1130 ProSiteProfiles Protein kinase domain profile. 838 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00388 1130 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Car07g00388 1130 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Car07g00388 1130 MobiDBLite consensus disorder prediction 796 810 - -
Car07g00388 1130 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Car07g00388 1130 ProSiteProfiles Leucine-rich repeat profile. 674 695 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00388 Car-Chr7:1963440 Car17g00105 Car-Chr17:653769 5.62E-169 dispersed
Car16g00680 Car-Chr16:4321136 Car07g00388 Car-Chr7:1963440 3.89E-21 dispersed
Car03g00644 Car-Chr3:5823284 Car07g00388 Car-Chr7:1963440 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88977 PF00069 Pkinase 2.40E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00388 - - csv:101203208 1894.4