Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00389 ATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTTTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATGTCAAGGTGCACATGTGCAATAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTAGCAAGTCCGAGCGAAGTTTCCCGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGAAGCTCCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGTTTCCTGGGGATAAACAACATGATCCAAAGGACTTGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACCTGTAG 420 47.38 MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSRCDICENAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQHDPKDLQNQDGVDSNGDGHSKRGNEVIDLNL 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1970360 1971260 + Carg07969-RA Car07g00389 151623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00389 139 MobiDBLite consensus disorder prediction 102 116 - -
Car07g00389 139 ProSiteProfiles Zinc finger B-box type profile. 51 97 IPR000315 GO:0008270
Car07g00389 139 Pfam B-box zinc finger 52 85 IPR000315 GO:0008270
Car07g00389 139 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Car07g00389 139 MobiDBLite consensus disorder prediction 102 139 - -
Car07g00389 139 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00645 Car07g00389 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00690 Car-Chr4:4019555 Car07g00389 Car-Chr7:1970360 3.08E-55 dispersed
Car07g00389 Car-Chr7:1970360 Car16g00643 Car-Chr16:4091604 1.18E-65 dispersed
Car12g00406 Car-Chr12:2587799 Car07g00389 Car-Chr7:1970360 1.60E-21 wgd
Car03g00645 Car-Chr3:5830640 Car07g00389 Car-Chr7:1970360 1.16E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3824 PF00643 zf-B_box 1.10E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00389 - - cpep:111781183 253.062