Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00439 ATGGGGACAGGAGAAGAGGGCACGCCTTCTAAAACTTCCAAACCTCCCTCTTCATCTCAGGAAATACCCCCGACGCCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTACTATGGTGCTGGTGCTACTCCTCCTCCTTTCTTTGCATCCACTGTTGCTTCTCCAACTCCCCACCCTTACCTTTGGGGAAGTCAGCATCCTTTGATGCCACCTTATGGAACTCCAGTACCTTATCCAGCTATGTATCCTCCTGGGGGAGTTTATGCACATCCCAATATCACTGTGCCTCCTGGCTCTGCCCCAGTTAATGCGGAATATGAAGGAAAATCTCCCGATGGAAAAGAAAGGGCATCCAAGAAATCCAAGGGTACATCGGGAAATACTGGTTCAGGTGGCGGTAGGACTGGGGAGAGAGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCATCTCAAAGTGAAAGTGGTACTGAGGGCTCATCAGAAGGCAGTGATGAGAATGCTAACCAGCAGGAATTTGCTGCGAATAAGAAGGGCAGCTTCAACCAGATGCTGGCTGATGGAGCCAATGCACAAAGTAACACGGGTGGACCAAATTCCAAATCTTCAGTGACTGGGAAACCCATCACTTCCATTCCTGCAACTAATCTGAACATGGGAATGGATTTGTGGAATACCACCACTGCTGCCTCAGGGGCTGCAAAAGCAAGAGCAAACGCGGTCTCCTCAGCTATTGTTCCAGGAACGATGATTGGTCGTGATGGTGTGATGCCTGAACAATGGGCTCAAGATGAACGAGAGCTAAAACGACAGAAAAGGAAGCAATCTAACCGAGAGTCTGCTAGGAGGTCAAGATTACGTAAGCAGGCGGAGTGTGAAGAATTACAGGCGAGAGTGCAGACGCTGAACAACGAGAACCGTACTCTCAGGGATGAGCTGCAGAGACTCTCCGAGGAATGTGAAAAGCTAACATCAGAAAATAGTTCCATCAAGGAAGAATTGACACGATTTTGCGGACCGGAGGCATTAGCTAAATTTGAGAAAGGAACTGCTGCTACTCCGGCTGCCCAGTCGCGCGGTGGTGACGAGGGTAACAACTAA 1104 49.28 MGTGEEGTPSKTSKPPSSSQEIPPTPSYPDWSSSMQAYYGAGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPAMYPPGGVYAHPNITVPPGSAPVNAEYEGKSPDGKERASKKSKGTSGNTGSGGGRTGERGKVASSSGNDGASQSESGTEGSSEGSDENANQQEFAANKKGSFNQMLADGANAQSNTGGPNSKSSVTGKPITSIPATNLNMGMDLWNTTTAASGAAKARANAVSSAIVPGTMIGRDGVMPEQWAQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGPEALAKFEKGTAATPAAQSRGGDEGNN 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2224683 2230435 - Carg16036-RA Car07g00439 151673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00439 367 Coils Coil 279 334 - -
Car07g00439 367 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 268 331 IPR004827 GO:0003700|GO:0006355
Car07g00439 367 MobiDBLite consensus disorder prediction 348 367 - -
Car07g00439 367 MobiDBLite consensus disorder prediction 252 291 - -
Car07g00439 367 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 273 288 IPR004827 GO:0003700|GO:0006355
Car07g00439 367 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Car07g00439 367 MobiDBLite consensus disorder prediction 1 69 - -
Car07g00439 367 MobiDBLite consensus disorder prediction 141 217 - -
Car07g00439 367 MobiDBLite consensus disorder prediction 96 217 - -
Car07g00439 367 MobiDBLite consensus disorder prediction 260 275 - -
Car07g00439 367 Pfam bZIP transcription factor 266 328 IPR004827 GO:0003700|GO:0006355
Car07g00439 367 MobiDBLite consensus disorder prediction 1 39 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00698 Car07g00439 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00559 Car-Chr6:3160924 Car07g00439 Car-Chr7:2224683 1.12E-66 dispersed
Car06g00874 Car-Chr6:6835704 Car07g00439 Car-Chr7:2224683 1.63E-45 dispersed
Car07g00439 Car-Chr7:2224683 Car16g01124 Car-Chr16:9650808 1.19E-64 dispersed
Car03g00698 Car-Chr3:6103484 Car07g00439 Car-Chr7:2224683 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3831 PF07777 MFMR 7.90E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00439 K09060 - csv:101217128 608.216