Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00441 ATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA 651 50.08 MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2236257 2237343 - Carg16034-RA Car07g00441 151675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00441 216 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Car07g00441 216 MobiDBLite consensus disorder prediction 26 56 - -
Car07g00441 216 Pfam Homeodomain 57 110 IPR001356 GO:0003677
Car07g00441 216 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Car07g00441 216 Coils Coil 103 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00441 Car-Chr7:2236257 Car16g00757 Car-Chr16:4792081 1.40E-28 dispersed
Car04g00718 Car-Chr4:4163002 Car07g00441 Car-Chr7:2236257 1.44E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3832 PF00046 Homeodomain 1.30E-16 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00441 K09338 - csv:101216890 296.589