Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00501 ATGGCGGATGGCTTTTACTGTACAGAGAGTGTCAATGCTTGCTTTGATGAGCTTGAATGTAATGCCACAAACAATGAGTTTGAGCGAATCGAGTGTTTTGGATCCGGGAATTCGATGGTCTCTGCGATACAGAGTGAACAGAGGATAAGAGAAATGGTTGAGAAACAGATTCAGCATTTGCCTAGACATGATTATCTTAAGAGATTGCGCTGTGGGGCATTGGATTCCAAGTTTAGGAGAGACGCTATTGATTGGATTTCGAAGGCTCATGCCCATTACAGCTTTGGAGCTTTGAGTCTATGTCTATCTATGAACTACTTGGATCGTTTCCTCTCAGAGTATCACATGCCTATGGATAAAAGCTGGAGTGTACAGCTGCTGTCAGTAGCTTGTATGTCTCTGGCAGCCAAGATGGAGGAGACAGAAGTTCCTCTTCCCATAGATTTACAGGTTGAGGAGCCCAAGTTCGTGTTCGAATCAAAAACCATTCAAAGAATGGAGCTTCTGGTTCTAAGTAGGTTGAAATGGAAGATGCAAGCCATTACTCCATTTTCTTTCATTGATTATTTCCTCACTAACATCACTCTTGAGCCGCACGAACCGAGGCTATCCTTATTCAAATCTTCACAGCTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAACCCTCTGAAATTGCTTTGGCTGTGGCTATGTCTGTTTCTGGAGTAGTTCAAGCAGCAGACATCAATAAAGCAATCCTTGCTTTTCCATACATGGAGAAAGTAATACAAAAAGCTTTTAAAAAAGACATCTTTGAGAGAGTAATGAAGTGTATTGAGCTGATAAGAGATTTTCCATTGATTGGTGGTTCGGTTCCTCAGAGCCCTGTTGGAGTGTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTAGCAGCAGGGTCGTGCGGTAATTCTTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGAAGGAGACTAGAGAGACCATGA 1008 42.26 MADGFYCTESVNACFDELECNATNNEFERIECFGSGNSMVSAIQSEQRIREMVEKQIQHLPRHDYLKRLRCGALDSKFRRDAIDWISKAHAHYSFGALSLCLSMNYLDRFLSEYHMPMDKSWSVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFESKTIQRMELLVLSRLKWKMQAITPFSFIDYFLTNITLEPHEPRLSLFKSSQLILSTIKGIDFLEFKPSEIALAVAMSVSGVVQAADINKAILAFPYMEKVIQKAFKKDIFERVMKCIELIRDFPLIGGSVPQSPVGVLDAACLSYKTEELAAGSCGNSSSSSHDSPDSKRRRLERP 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2508069 2509534 - Carg15973-RA Car07g00501 151735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00501 335 Pfam Cyclin, C-terminal domain 181 252 IPR004367 -
Car07g00501 335 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Car07g00501 335 MobiDBLite consensus disorder prediction 311 335 - -
Car07g00501 335 Pfam Cyclin, N-terminal domain 50 178 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00478 Car-Chr5:2720856 Car07g00501 Car-Chr7:2508069 9.40E-92 dispersed
Car07g00501 Car-Chr7:2508069 Car16g00277 Car-Chr16:1723405 3.42E-59 dispersed
Car12g00196 Car-Chr12:1241291 Car07g00501 Car-Chr7:2508069 6.02E-90 wgd
Car03g00762 Car-Chr3:6407386 Car07g00501 Car-Chr7:2508069 3.09E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00501 K18810 - csv:101209378 461.07