Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00513 ATGACTGGTAAAGCAGACAAGGTCTACGTTGCTATCGGAAATGATCTTCACGATGGATTCAAGACATTGGGGTGGACTCTTGGGAAATGGAAGACTCAACCGATTTCAATTGTGATTCTTCACATCGCCTACACCAATTCCCAGGAATATGTCTACACTCCGTTCGGAAAGCTCCCTGCGAGTTCTGTAAGTGAAGAGAAAGTGAAAGTTCTGAGAAAATATGAGCAGGAAAAGATCGATAAGCTACTTTCTAAATATGTAGATTTTTGTGGCAAGGTAAAAGCCGAAATACTCAAGGTTGAGAAATCTGATGAACCTATTCATAGGTTCCTTGTTGACTTAATTTCAGAATTGGGAATCACCAATTTAGTCATTGGTTTTACGTTTATGAAATCTTCATCTTGGAAATCAAAGAATGCAATTAGTGGATCATTTTACATTTACAGAAACAAGGCCAATTCTTGTGAGTTGTTTGTAATATGGGGAGGAAAACAGGTATTTCTCAGAGATGAAAGAATCATGGAAGATGATAAAGGTGTAAGGATCTCTAAAATCAGCAGCAAGCATTCATTCAAAGACTGGCTGGGAAAGATGTTCATGGAAGATCCAATCTATTCCACAGAGAGGATGTTGAGTCTCTCGTCTTCTTCACCAAGTAGTTCAAATTCCTTGAGTTCTCGAAATTATTGGGACAATAATATCCATGAACTAGAGAACTACTACGAGGAATTACTATCGTTGAATTTGCAGGAAGAAAAAGACTGCGAGCAGGATCAAGAGGATGTTCTTGAAACTTCAAGTTCAACCCAGTTCAATATTCTGGATCATCCTGATTCAGATATGAATACTGAGGAAAGCATTGAGCATCTAAGGACTAAAATAGAGGAAGCTCGCAAGACCATTCAGTTGATGAAAGATGAAGCAAAGGGTAGTGCTGAAAGGCAAGCTAAAGCAGAGTGGGCCATTAATCTGTGCAGTCAGCGGACCGAAGAGCTTGAAGCACAGATAAAAGAAGAGGTTACAATTAGGGAAGAGTTGCAGAAAGAATTAGACCCTGCCAAAGAATGCATTCTTGAAATAGTACGTGATATCGAGGAAAGCAAGAACAGAATAAGTTCACTTCTCGAACTGCAAGCTGAGCTATCAAGGAAGCTCCAAATTTCCACTGCAGGAAAATCGCGTATAGAAGCTCAATTGGAGAAGACAGCGAAAACGAGGGAAGGGATGGTGAGAGAAATCGAGGAGCTGAGGAGACAGAGAGACATTCTTAACCGGAGAATTGAGTTCTGCAAAGAGAAAGATGCCAATGGAATGGCTGAAAGGTCGACTGAAGTGACTTGCAGTACAAGAGTTTACACGGCTGAAGAGATCAGATTAGCCACCGAGGGCTTTTCAGAACAAATGAGATTGAGTTCCCAGGTGTACAGAGGACGTATCAATCATAATTCAATTGCAATCCAAATGATCGACTCAGGAAATTGTCTGTCAGAAGAAGATTTTCAATCTAAGGTGGAGCTTTTAAGCCATATCCGTCACCCTCATCTGATTGCCATGATGGGATTCTGCTCCGAGCTCAAATGTATTGTCTTTGATTACATGCATAATGGTAGCTTAAGTGACAGACTACTTCCAACCAACAGAAGATCCAGGAAAATACGCCGCCCTCTCATGTGGCGTGACAGAATCCGTATAGCATCAGAGGTATGCTCGGGCCTGAGCTTCCTTCACCAGGCTCAACCTCAGCCCATTTCTCATGGCAACCTCACCCTCTCAAAAATTCTCCTGGACCAAAACCTTGTCGCCAAAGTCACTGGTTTTGGGCTTGCCGAATTGGATGAAGCTGGTGGCATTGAGTTGGACATCCGGGCTTTTGGGGCTCTGCTGCTACATCTGGTAACTGGGAGGAATTGGACAGGGCTGATTGAGAAGGCACCGACGATGGGAAAGGTTGGTATTGTCCAGATTTTAGACGATGAGGCTGGACAGTGGCCGTTGGACTTGGTTGATGGGCTAGTTGATCTGGCTTTGAGATGCGTAACCCCAAATGGTTTAAATTCAGAGCTTAACTTGGCGACAGCCATGGAGGAGATCAATGAGATCAAGGCGAAAGCAGATGATCTAGTGGGAAACGAAGGTGCAAATGCAACTAATGAGGATGTAGATGATGTGCCAAGAATCTTCATCTGTCCCATCTTGCAGGAAGTGATGAAGAACCCACATGTGGCAGCAGATGGGTTCTCGTACGAGTTAGAGGCCATAGAACAATGGATAATTGCAGGACACGATACATCACCAATGACCAACTTGAGGTTACAGCATCCTTATCTCACCCCTAATCACACACTTCGCTCTCTCATTCAAGACTGGCAAAATGAGACCTCAAATCTTTACACTTTAGATTTAGCGACTGATAGTTGA 2418 42.97 MTGKADKVYVAIGNDLHDGFKTLGWTLGKWKTQPISIVILHIAYTNSQEYVYTPFGKLPASSVSEEKVKVLRKYEQEKIDKLLSKYVDFCGKVKAEILKVEKSDEPIHRFLVDLISELGITNLVIGFTFMKSSSWKSKNAISGSFYIYRNKANSCELFVIWGGKQVFLRDERIMEDDKGVRISKISSKHSFKDWLGKMFMEDPIYSTERMLSLSSSSPSSSNSLSSRNYWDNNIHELENYYEELLSLNLQEEKDCEQDQEDVLETSSSTQFNILDHPDSDMNTEESIEHLRTKIEEARKTIQLMKDEAKGSAERQAKAEWAINLCSQRTEELEAQIKEEVTIREELQKELDPAKECILEIVRDIEESKNRISSLLELQAELSRKLQISTAGKSRIEAQLEKTAKTREGMVREIEELRRQRDILNRRIEFCKEKDANGMAERSTEVTCSTRVYTAEEIRLATEGFSEQMRLSSQVYRGRINHNSIAIQMIDSGNCLSEEDFQSKVELLSHIRHPHLIAMMGFCSELKCIVFDYMHNGSLSDRLLPTNRRSRKIRRPLMWRDRIRIASEVCSGLSFLHQAQPQPISHGNLTLSKILLDQNLVAKVTGFGLAELDEAGGIELDIRAFGALLLHLVTGRNWTGLIEKAPTMGKVGIVQILDDEAGQWPLDLVDGLVDLALRCVTPNGLNSELNLATAMEEINEIKAKADDLVGNEGANATNEDVDDVPRIFICPILQEVMKNPHVAADGFSYELEAIEQWIIAGHDTSPMTNLRLQHPYLTPNHTLRSLIQDWQNETSNLYTLDLATDS 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2583501 2586873 - Carg18489-RA Car07g00513 151747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00513 805 Coils Coil 329 349 - -
Car07g00513 805 Coils Coil 399 433 - -
Car07g00513 805 ProSiteProfiles U-box domain profile. 722 796 IPR003613 GO:0004842|GO:0016567
Car07g00513 805 Pfam U-box domain 723 794 IPR003613 GO:0004842|GO:0016567
Car07g00513 805 ProSiteProfiles Protein kinase domain profile. 454 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00513 805 Coils Coil 287 314 - -
Car07g00513 805 Pfam Protein tyrosine and serine/threonine kinase 473 610 IPR001245 GO:0004672|GO:0006468
Car07g00513 805 Coils Coil 364 384 - -
Car07g00513 805 Coils Coil 690 710 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00513 Car-Chr7:2583501 Car02g00581 Car-Chr2:4431413 4.28E-77 dispersed
Car07g00513 Car-Chr7:2583501 Car06g00904 Car-Chr6:6998994 7.15E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88981 PF07714 PK_Tyr_Ser-Thr 1.70E-18 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00513 - - cmos:111463274 1502.26