Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00521 ATGGAGCTCACTCAATGTGGTTTCTTAGAGGAGTTATTAGCTTCAACGCCTTGGACCTCCTCCTCCTCCTCCTCCTCCTATTCAAATGGGTTCAATGATTTCTTCCCAAATGGCTGCAATTTCAGTTCTTTTGATGAAATTCCCCAAATGGGTACCTCTATTTCACCCCATTTTCCCGGTTTTCAAACGCCTACTGACTTTTCTTTCGCCGACCAACACCTCTACGGCAGTTTTCTTGAAGGGTTTGCATTGCCGGAGGTGGATTCTTCATCGTACACTAAGAACAACGAAACCCCACCATTTGTTTCGGTAGAGGAGATTAGTAATAAGAACAGTGGTTTCCCTCCGACGGCGATGGAGGAGGAAGAATTTGGTTTTATGGAGTGTGAAGCGGCACCAAATGTTTGCAAACAGGAAATGGAGGTAATGGGTGGGCGTGAAAGTAATGATTCTAAAATGGGTGTGGCAGAATTGGGGAAAAGAAGAAGCAACAAGGCTAAGAAGCTTGATGGACAGCCTTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAGACGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTTCCTAAAATAAGCAAGATGGATAGAACGTCTATTCTTGGAGACACGATCGATTACGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAAGAAGAAGATTCAAATCATGCAAGTCTAAATGGGATCTCCAAGGAAAGGAAGTCCAATGAAGTTCTGTTCGACGTTGAAAGGAAGGAGATGGAGACTCGGATCGGCATTTGCTGTACGACGAGGCCAGGATTATTGCTATCCACCGTCAACACATTAGAGGCATTGGGCCTAGAGATTCAGCAGTGTGTTATTAGCTGCTTCAATGATTTCTCAATGCAAGCTTCTTGTTCAGAGGGAAGTTCTCAGAAAGTAGTGCCAAGTTCTGATGATATAAAGGAGGCATTGTTCAGAAATGCAGGCTATGGAGGGAAGTGCTTGTAG 1005 43.78 MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPGFQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAMEEEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2631738 2632997 + Carg18497-RA Car07g00521 151755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00521 334 Pfam Helix-loop-helix DNA-binding domain 177 220 IPR011598 GO:0046983
Car07g00521 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Car07g00521 334 Coils Coil 210 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00521 Car-Chr7:2631738 Car09g00538 Car-Chr9:3044325 9.78E-58 dispersed
Car12g00162 Car-Chr12:929971 Car07g00521 Car-Chr7:2631738 5.53E-59 wgd
Car03g00782 Car-Chr3:6511291 Car07g00521 Car-Chr7:2631738 4.34E-180 wgd
Car05g00509 Car-Chr5:2951105 Car07g00521 Car-Chr7:2631738 4.66E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3840 PF00010 HLH 2.20E-09 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00521 - - cmax:111497242 632.869