Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00534 ATGCGTCTTCTTCCTCTTCTTCTCCTTTGTCTTCTGCAACTTCACATTCACCATTGTTGTTCGGCTCGTGTTTCTGAGTATCGAGCTCTGCTCTCGCTTAGAACCTCCATTTCTGGTGACCCCAAATCCTCGCTCTCTTCGTGGAATGCTTCCACCAGTCACTGTACTTGGTTTGGGGTTACTTGCGATGTTCGTCGCCATGTCACTGCCCTTGACCTCTCTGGTCTCGGGCTTTCTGGTTCTCTTTCGCCTGATGTGGCCTATTTGAGGTTTCTTACTAATCTTTCTCTTGCGTCCAATGATTTCTCGGGTCCAATCCCGCCGGAGATTTCTTCCATTTCTTCTCTTCGGTTCCTGAACCTGTCTAATAATGTCTTCGATGGGTCGTTCCCTACGCAGCTTTCGCAGCTTCGGAATCTGCAGGTTCTTGATTTGTATAACAACAATATGACTGGGGATTTCCCCATTGTCGTTACTGAAATGATGAGCCTCCGCCATTTGCATTTGGGTGGAAATTTCTTCGCCGGAGCGATTCCGCCGGAAGTCGGTCGGATGGAGTCCTTGGAGTACTTTGCGGTTTCTGGTAACGAACTCGGCGGTTCCATACCGCCGGAAATCGGGAACTTGACGAATCTTCGTGAGCTTTACATTGGCTACTTCAACGCGTACGTCGGCGGGATTCCGGCTGAGATTGGGAATTTGTCGGAGTTGGTACGGTTGGACGCGGCCAACTGTGGACTCTCTGGTCGGATTCCACCGGAGCTCGGAAAGCTGAAGAACCTGGATACGCTGTTTCTTCAAGTAAATGGTCTATCTGGGCCATTGACGCCGGAGATTGGAGAGTTGAATGGCTTGAAATCGTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCCAGCTCGTTCTCCGAGCTCAAGAACTTGACGCTGTTGAATCTGTTTAGAAACAAGCTTCATGGAGCGATTCCTTCCTTTATTGGGGAGTTGCCAAAGCTGGAGGTGTTGCAGTTATGGGAGAATAATTTCACGGAAGCGATTCCACAGAACCTGGGCAAGAACGGAATGCTTCAGATTTTGGATCTTTCTTCCAACAAGCTCACCGGAAATCTTCCTCCCGATATGTGCTACGGTAATCGCCTTCAAACTCTCATCGCATTGAGCAATTTCTTGTTTGGTCCAATCCCAGAGTCGCTAGGCAAATGTGTTTCGCTTAATCGGATTCGTATGGGGGACAATTTTCTTAATGGATCTATCCCAAAGGGGCTTCTCAGTCTGCCGGACCTCTCTCAGGTTGAGTTACAGGACAATTACCTCTCCGGCGAGTTCCCTGTAACCGATTCAATCTCCGTCAATCTGGGCCAGATTAGTCTCTCGAACAATCGCCTCTCCGGGTCGATTCCACCCACTATCGGCAACTTCTCCGGCGTCCAGAAACTACTCCTCGACGGAAATAAATTCTCCGGTCAAATCCCACCTGAGATTGGGCGGTTACAGCAACTCTCAAAGATTGATTTCAGTAACAACAAGTTTTCAGGTCCAATCGCACCGGAGATTAGCCAATGCAAGCTGCTAACCTTCGTCGATCTCAGTCGGAACGAGCTCTCCGGTGAAATTCCAAACGAGATTACGAGTATGAGAATATTGAATTACCTAAATCTTTCAAAGAACCATTTAATCGGTGGAATCCCAGCTTCCATAGCCAGTATGCAGAGTTTGACCTCTGTAGATTTCTCATACAACAACCTCTCCGGCTTAGTTCCGGGAAGTGGGCAATTCAGCTACTTCAATTACACATCGTTTCTGGGCAATCCTGATCTCTGCGGCCCATATTTAGGACCATGCAAAGATGGGGTCGCCAATAGCAATTACCAACAACATGTAAAAGGTCCCTTCTCTGCTTCCCTTAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCAATTGCATTTGCAGTGGCTGCAATCATCAAAGCTCGATCATTGAAGAGAGCCAGTGAGTCTCGGGCTTGGAAATTAACATCCTTCCAACGCCTAGATTTCACAGTTGATGATGTTCTTGATTGCTTGAAAGAGGACAACATCATTGGAAAAGGAGGTGCTGGAATTGTGTATAAAGGGGCGATGCCTAGTGGTGACCACGTTGCTGTCAAAAGACTGCCGGTGATGAGCCGAGGGTCTTCCCACGACCATGGATTCAACGCTGAGATACAAACTCTTGGGAGGATTCGACATAGACACATTGTTAGGCTATTGGGATTTTGTTCAAATCATGAGACAAATCTTTTGATTTATGAGTATATGCCTAATGGGAGCCTGGGGGAAGTTCTTCATGGGAAAAAAGGAGGTCACTTACAATGGGACACAAGGTATAAGATTGCCATTGAAGCTGCCAAAGGGCTTTGCTATCTCCATCATGATTGCTCGCCGCTCATTGTTCATCGAGATGTCAAATCAAACAACATACTTCTTGACACTAATTTTGAAGCTCATGTAGCTGATTTTGGCCTGGCCAAGTTCTTGCAGGATTCCGGCACTTCTGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATATATTGCTCCAGAATACGCTTACACGCTCAAAGTTGACGAGAAGAGTGACGTATATAGCTTTGGAGTTGTGCTCTTGGAGCTTGTTAGCGGAAGAAAACCGGTCGGAGAATTCGGGGACGGTGTTGACATAGTCCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTAGTGAAAATCCTTGATCCAAGGCTGTCCTCCATCCCTCTCCATGAAGTGTCACACGTCTTCTACGTTGCAATGCTGTGCGTCGAAGAACAGGCGGTGGAGCGCCCGACGATGCGGGAAGTGATCCAAATCCTGTCGGAGGTCCCACAGCCACCATGTTCAAAACCAGGAGATTCAGCACTCCCAAACTCCTCACCACCACCACCACCAGCGGCAGTAGCATTGGACCCTCCAACAACAGGAACCAAGAACAAAAAGGAGCAGCAGCCGCCACCGGATCTTCTTAGCATTTGA 3042 47.8 MRLLPLLLLCLLQLHIHHCCSARVSEYRALLSLRTSISGDPKSSLSSWNASTSHCTWFGVTCDVRRHVTALDLSGLGLSGSLSPDVAYLRFLTNLSLASNDFSGPIPPEISSISSLRFLNLSNNVFDGSFPTQLSQLRNLQVLDLYNNNMTGDFPIVVTEMMSLRHLHLGGNFFAGAIPPEVGRMESLEYFAVSGNELGGSIPPEIGNLTNLRELYIGYFNAYVGGIPAEIGNLSELVRLDAANCGLSGRIPPELGKLKNLDTLFLQVNGLSGPLTPEIGELNGLKSLDLSNNMLVGEIPSSFSELKNLTLLNLFRNKLHGAIPSFIGELPKLEVLQLWENNFTEAIPQNLGKNGMLQILDLSSNKLTGNLPPDMCYGNRLQTLIALSNFLFGPIPESLGKCVSLNRIRMGDNFLNGSIPKGLLSLPDLSQVELQDNYLSGEFPVTDSISVNLGQISLSNNRLSGSIPPTIGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSNNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLIGGIPASIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQQHVKGPFSASLKLLLVIGLLLCSIAFAVAAIIKARSLKRASESRAWKLTSFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDHVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLIYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVVKILDPRLSSIPLHEVSHVFYVAMLCVEEQAVERPTMREVIQILSEVPQPPCSKPGDSALPNSSPPPPPAAVALDPPTTGTKNKKEQQPPPDLLSI 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2714563 2717821 + Carg18510-RA Car07g00534 151768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00534 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Car07g00534 1013 ProSiteProfiles Protein kinase domain profile. 690 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00534 1013 MobiDBLite consensus disorder prediction 977 991 - -
Car07g00534 1013 Pfam Protein tyrosine and serine/threonine kinase 692 961 IPR001245 GO:0004672|GO:0006468
Car07g00534 1013 MobiDBLite consensus disorder prediction 964 1013 - -
Car07g00534 1013 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Car07g00534 1013 Pfam Leucine Rich Repeat 285 306 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01552 Car-Chr1:12971729 Car07g00534 Car-Chr7:2714563 0 dispersed
Car07g00002 Car-Chr7:25091 Car07g00534 Car-Chr7:2714563 0 dispersed
Car07g00534 Car-Chr7:2714563 Car07g01339 Car-Chr7:8425717 0 dispersed
Car07g00534 Car-Chr7:2714563 Car07g00535 Car-Chr7:2720999 0 tandem
Car16g00765 Car-Chr16:4852458 Car07g00534 Car-Chr7:2714563 0 transposed
Car03g00791 Car-Chr3:6561979 Car07g00534 Car-Chr7:2714563 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88982 PF07714 PK_Tyr_Ser-Thr 2.20E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00534 - - cmos:111463083 1942.16