Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00535 ATGACAAACAGAAAGCATTCAAAATTTGTATGCAAAAAGATGAGATTTTTTGCGATTATTCTCCTTCTGCACCTGCAAATTCTGCAACTTTACTTTTCCCCTGCCTTCTCTGTATCCCTGACTGAATCACAGGCCCTTCTCTCCTTCAAAAACTCCATCTCCGATGACCCTCGTTCTTCTCTCTCCTCCTGGAACGCCGCCGTCGACCCCTGTACCTGGCCTCGCGTCACATGCGATGCCCGTGGCCATGTCCTCGCCCTCCACCTCTCTTCTCTCGACCTTTCCGGCACCCTTTCTCCTCATCTTGCCTCTCTTCCGTTTCTCACCAATGTTTCCTTCCAACTCAACAAATTCTCCGGCGGAATCCCCCCCGAGTTTGCCTCCATTTCTTCTCTCCGCCATCTTAATCTCTCTAGCAACCTCCTCAACGGCTCGATTCCTAGCGAGTTTTCGCAGCTGAAGAATCTACAAGTTCTCGATGTTTATAACAACAACATGACCGGCGTTTTCCCCAGAGTGGTCACTGAAATCCCCAATCTTCGCCATTTACACCTTGGGGGAAATTTCTTCTCCGGTCGAATCCCTCCGGAGATTGGACGCTTGCAGTTCTTGGAGTTTCTGGCGATTCATGGCAACGACCTTGAAGGTCCGATTCCGGCGACGATCGGAAACTTGAAGAACCTTCGACAACTCTTCATTGGTTACTACAACACCTTCGTCGGTGGAATACCAGCGGCGATAGGAAACTTGTCGGAGTTAGTTCTGTTAGATGCCGCGAGCTGTGGTTTGTCCGGAAAGTTCCCGCCGGAGCTCGGAAAGTTGCAGAAGCTCACTAAACTATTCCTTCAAGAAAATGCTCTGTCTGGATCATTAACAGAGCTAGGAGGATTGAAGAACATACAATCATTGGATATATCATGCAATATGCTTGTTGGTGAAATACCCATCTCTTTTGCAGAGTTCAAGAACTTGACACTATTGCACCTTTTCGACAATAAGCTCTCCGGTGAGATTCCGGGATTCATGGGTGACCTCCCAAACTTAGAGATATTGCAATTATGGAACAATAATTTCACTGGTTCGATTCCTCCGAATTTGGGGAAGAACAAACTGCTTCTGTTTCTCGATCTTGCTTTCAACCAGTTGACAGGCACAATTCCTTCTGAAATTTGCCATGGCAATCATCTTGAAGTTTTGATCCTTATGGGCAATTCCTTACATGGTTCCATCCCAGAATCGTTAGGAAATTGTACATCACTTAGGCGTATACTTCTGTGGGGCAACGCTCTCAATGGATCAATTCCAAAGGGGCTTTTGGGTTTGCCAAATCTCACTCAAATTGATTTGCACGACAATTTTCTCTCCGGAGAACTTCCCATTACCGATTCAGCCTCAGTTAACCTTCTTCAGATCAGTTTATCCAACAATATGATCTCTGGATCTTTGCCGCCCACCATCGGCAACCTTCTGGCTGTCCAGAAGCTTCTTCTTGATCGGAATAAGTTTTCCGGTGAGATTCCTTCGACGATTGGGAGATTACAGCAACTATCTCGGATAAATTTCAGCCAGAATAAATTCTCCGGTAGAATTGTGCCGGAGATAAGTGAGTGCAAGCACTTGATCTTCCTTGATCTTAGTGGAAATGAGCTTTCAGGTGAAATTCCTAATAATATTACCAACATGAAATTATTGACATACATGAATCTTTCAAGAAACCATTTAGTTGGGTCAATTCCTGCTTCCATAGTTCATATGCAGAGCTTAACTTCTGTGGATTTTTCATATAACAATCTCTCTGGTTTGGTTTTGGGAACTGGGCAATTTGGTTACTTCAATTACACATCATTTCTTGGCAACCCTTATCTGTGTGGAGCCTATTTAGGGCCTTGCAATCATCAAGAACATATGAAGGTCTCCCTCTCAACTCCTCTCAGGCTCCTCCTAGTTTTTGGATCTTTTTTCTGTTTATTTGCTTTGACTGTTGCTTTGATCTTCAAAGTTCGGTCATTGAGGAGAGCAAGGGAGTTTCAAGGATGGAGATTAACAGCCTTCCAACGCTTGGGTTTCTCGGTTGATGAGGTCTTGAATTGCCTTAAGAAGGAAAATGCTATTGCAAAAGGAGGTTATGGCACGGTATATGAAGGAGTGATGCCTAGTGGTGATCAGGTCACTGTGAAGAGACTTCCAAAGATGAGCGATGGGTGTTCTAATGACGACGGGTTCGATACCGAGATACAAGCTCTTGGGAGGATTCGACACCGTCACGTTGTTAGATTATTGGGGTTTTGTTCAAACCATGACACTGGTCTTTTGGTATATGAGTACATGCCTAATGGGAACCTCTATGAGGTTCTTCATGGCAAGAAAGGAGGCCATTTGCTTTGGGATACGAGGTACAAGATAGCCATTGGAATTGCGAATGGACTCTGCTACCTTCACCACCATTGCTCACCGCCGATCGTTCATCGAGATGTGAAATCGAACAACATTATGCTCGACACCAATTTTGATCCTCAGCTTGCCAATTCTGGGCTCGCGAAGTTCTTACAAGATGCGGGCACATTGGTTCGATCAGCTCTTGCACCAGAACATGTCGACGAGAAGTGGGATGTATATAGCTTTGGCATCGTCCTCTTCGAACTTGTTAGCGGTAGGAATCCAGTTGGTGAATTAAGCGACGGTGTGGACATAGTCGAATGGGTTAGAAAAATGACGAACTCAGAAAAGGAAGGAATACATAAAATGGTTGATCAAAGACTCTCTTGTGTCCCCCTCGACGAGGTGATGCACGTTCTCAACGTCGCCATGCTCTGCACTGAAGAAGAGGCAGCAAAGCGCCCCACGATGCAGGAAGTCGTGCGAATCTTATCGGAGCATCAGCAACAATGA 2889 45.34 MTNRKHSKFVCKKMRFFAIILLLHLQILQLYFSPAFSVSLTESQALLSFKNSISDDPRSSLSSWNAAVDPCTWPRVTCDARGHVLALHLSSLDLSGTLSPHLASLPFLTNVSFQLNKFSGGIPPEFASISSLRHLNLSSNLLNGSIPSEFSQLKNLQVLDVYNNNMTGVFPRVVTEIPNLRHLHLGGNFFSGRIPPEIGRLQFLEFLAIHGNDLEGPIPATIGNLKNLRQLFIGYYNTFVGGIPAAIGNLSELVLLDAASCGLSGKFPPELGKLQKLTKLFLQENALSGSLTELGGLKNIQSLDISCNMLVGEIPISFAEFKNLTLLHLFDNKLSGEIPGFMGDLPNLEILQLWNNNFTGSIPPNLGKNKLLLFLDLAFNQLTGTIPSEICHGNHLEVLILMGNSLHGSIPESLGNCTSLRRILLWGNALNGSIPKGLLGLPNLTQIDLHDNFLSGELPITDSASVNLLQISLSNNMISGSLPPTIGNLLAVQKLLLDRNKFSGEIPSTIGRLQQLSRINFSQNKFSGRIVPEISECKHLIFLDLSGNELSGEIPNNITNMKLLTYMNLSRNHLVGSIPASIVHMQSLTSVDFSYNNLSGLVLGTGQFGYFNYTSFLGNPYLCGAYLGPCNHQEHMKVSLSTPLRLLLVFGSFFCLFALTVALIFKVRSLRRAREFQGWRLTAFQRLGFSVDEVLNCLKKENAIAKGGYGTVYEGVMPSGDQVTVKRLPKMSDGCSNDDGFDTEIQALGRIRHRHVVRLLGFCSNHDTGLLVYEYMPNGNLYEVLHGKKGGHLLWDTRYKIAIGIANGLCYLHHHCSPPIVHRDVKSNNIMLDTNFDPQLANSGLAKFLQDAGTLVRSALAPEHVDEKWDVYSFGIVLFELVSGRNPVGELSDGVDIVEWVRKMTNSEKEGIHKMVDQRLSCVPLDEVMHVLNVAMLCTEEEAAKRPTMQEVVRILSEHQQQ 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2720999 2724842 + Carg18511-RA Car07g00535 151769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00535 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Car07g00535 962 ProSiteProfiles Protein kinase domain profile. 698 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00535 962 Pfam Protein tyrosine and serine/threonine kinase 699 956 IPR001245 GO:0004672|GO:0006468
Car07g00535 962 Pfam Leucine rich repeat 131 188 IPR001611 GO:0005515
Car07g00535 962 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00535 Car-Chr7:2720999 Car16g00765 Car-Chr16:4852458 0 dispersed
Car09g00557 Car-Chr9:3152362 Car07g00535 Car-Chr7:2720999 7.77E-152 dispersed
Car19g00834 Car-Chr19:8837389 Car07g00535 Car-Chr7:2720999 1.25E-12 dispersed
Car07g00534 Car-Chr7:2714563 Car07g00535 Car-Chr7:2720999 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88983 PF07714 PK_Tyr_Ser-Thr 3.00E-35 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00535 - - cmos:111463083 1860.5