Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00543 ATGGGTTTTGACGATCTTCCTAATACGGGTCTTCTATTGGGATTGGGGTTAACGCTTCAATCCAAGCCCGCCTGCCTTTCTCAAAAACCCAACAACCCTGTCGATTTGTTCAGTTTCCCCGCCGTCGAATCCGAGCCGTCCTTAACTTTGGGGCTTTCTACTACGGCTGACTTGTGTCGTCAACCGTCCCCTCACAGCACGGTTTCTTCCCTCTCTGGCGGAAGGGTCAAGCGTGAAAGAGACGTTTCCGGCGAGGATATTGAAGAAGAGAAAGCTTCTTCTCGGGTTAGTGATGAGGAGGAAGATGGGTCTAATGCTAGGAAGAAACTTAGGCTAACTAAAGAACAATCCGCCCTCTTGGAGGAGAGCTTCAAACTTCACTGCACTCTCAACCCTAAGCAAAAACAAGCCTTGGCCAGAGAGTTGAATCTTCGGCCTCGACAAGTTGAAGTTTGGTTCCAGAACAGAAGAGCCAGGACAAAGCTAAAGCAAACAGAGGTAGATTGCGAGTTTCTAAAGAGATGCTGCGAAACGCTAACAGACGAAAACAGAAGACTGCAAAAAGAGCTGCAAGAATTGAAAGCCCTGAAACTAACCAAGCCTCTGTTCATGCAAATGCCGGCGGCAACACTCACCATGTGCCCCTCCTGCGAGCGGATCGGCAGCGCCACCGCCACTGTTAACGGCAACGGGAATTCCAAGGCCGCATTTTCAATGGCTCCAAAGCCCCAGTTTTACAAACCCTTCACCAATCCCTCTGCTGCTTGCTAA 771 49.94 MGFDDLPNTGLLLGLGLTLQSKPACLSQKPNNPVDLFSFPAVESEPSLTLGLSTTADLCRQPSPHSTVSSLSGGRVKRERDVSGEDIEEEKASSRVSDEEEDGSNARKKLRLTKEQSALLEESFKLHCTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLQKELQELKALKLTKPLFMQMPAATLTMCPSCERIGSATATVNGNGNSKAAFSMAPKPQFYKPFTNPSAAC 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2754898 2755956 - Carg18519-RA Car07g00543 151777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00543 256 Pfam Homeobox associated leucine zipper 163 197 IPR003106 GO:0006355|GO:0043565
Car07g00543 256 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Car07g00543 256 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Car07g00543 256 Pfam Homeodomain 107 161 IPR001356 GO:0003677
Car07g00543 256 MobiDBLite consensus disorder prediction 59 110 - -
Car07g00543 256 MobiDBLite consensus disorder prediction 59 73 - -
Car07g00543 256 MobiDBLite consensus disorder prediction 74 110 - -
Car07g00543 256 Coils Coil 169 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02028 Car-Chr4:16323750 Car07g00543 Car-Chr7:2754898 1.48E-48 dispersed
Car07g00543 Car-Chr7:2754898 Car16g01059 Car-Chr16:9103007 3.47E-77 dispersed
Car04g00792 Car-Chr4:4575375 Car07g00543 Car-Chr7:2754898 1.31E-106 transposed
Car03g00800 Car-Chr3:6593510 Car07g00543 Car-Chr7:2754898 1.46E-145 wgd
Car07g00543 Car-Chr7:2754898 Car09g00270 Car-Chr9:1477720 7.08E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3843 PF00046 Homeodomain 1.00E-15 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00543 K09338 - csv:101218782 402.134