Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00570 ATGGAGAGGTTTTTGGACGAGAATTTTGGAGGCGTCAAGCCCAAAAACTCGTCTGACGAGGTGCTCCAGAAGTGGAGGGATCTTTGTGGAGTGGTTAAGAACCCTAAAAGGAGGTTTCGCTTTACCGCCAATCTCTCCAAGCGTGGCGAAGCTGCTGCTATGCGCCAGAGTAATCAGGAGAAGTTGAGGGTCGCAGTTTTAGTCTCAAAAGCTGCATTTCAATTCATCCAAGGTATGCAACCAAGTGATTATAATGTTCCGGAGGATGTCAAAGCTGCAGGTTTCCATATTTGTGCTGATGAACTTGGGGCAATTGTTGAAGGCCATGATCCAAAGAAGTTAAAACATCATGGTGGTGTTGAAGGAATTGCTCAGAAGCTCTGTACATCAACAACAACTGGGCTTAATGGTGATGCTGATGCACTCAACCGTAGGCAAGAGATTTATGGGGTTAATAAATTTGCTGAGAGTGAACAGAGGAGTTTCTTGGTGTTCGTTTGGGAGGCACTCCAAGACATGACTCTCATGATCCTTGGACTCTGTGCCATCGTCTCTTTGGTAGTTGGCATAATAACTGAAGGATGGCCGCATGGGGCTCATGATGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTGACAGCAACTAGTGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAAAAGAAGATTTCAATTCAGGTTACAAGGAATGATTATAGACAGAAAATGTCAATTTATGATTTGCTTCCTGGAGATATTGTACACCTGTCTCTTGGGGACCAAGTTCCTGCAGATGGACTATTTGTTTCAGGGTTTTCTGTGTTGATTGATGAGTCAAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGAGTGCAGAAAGCCCTTTTCTTTTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGATCACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAAACTCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCATCATCACATTCGCTGTGTTGGTTCAAGGATTGGTTAGCCAGAAGCTTCGAGAAGGAACTCACTGGAACTGGTCAGGAGATGACGCATTAGAGATATTGGAATTCTTTGCCGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGGCTTCCTTTGGCTGTGACATTAAGCCTTGCCTTTGCCATGAAGAAAATGATGAATGATAAAGCACTTGTCCGTCACCTTGCAGCTTGTGAAACTATGGGTTCTGCCACAACTATTTGTAGTGACAAAACTGGAACAATCACTACAAATCACATGACAGTGGTCAAATCATGCATTTGCATGAATGTCAAAGAATCAAGTAATAATCCATCAAGCTTCTGCTCTGACCTTCCATCCTCCGTTGTCAAGCTTCTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAAATGGCAAACGTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTAGAGTTTGGTCTTTCACTCGGTGGTGATTTTCAGGCTGAGAGACAGGCTGGTAAACTTATTAAAGTTGAGCCATTCAATTCTTTGAAAAAGCGGATGGGTGTTGTCCTACAATTTCCTGAAGGTGGTTTCCGAGCTCACACTAAAGGTGCTTCAGAAATAGTATTGGCTGCCTGTGACAAGGTGATCAACTCGAGTGGTGAGGCTGTTCCTTTAGATGAAACTTCCACCAAACATCTCAATGTTATTATCGATCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTTGCCTATATGGAACTGGAAAATGGATTCTCTGTCAATGATCCTATTCCCGTTTCTGGTTATACCTGCATTGGTATTGTGGGTATTAAAGATCCTGTTCGTCCTGGTGTTAAGGAGTCTGTTGCAGTTTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACTGGCGACAATATTAATACTGCAAAAGCTATTGCTAAGGAATGTGGAATTCTCACTGATGATGGCATAGCCATTGAGGGTCCAGATTTCAGAGAGAAGACTCAAGAGGAATTGCTTAAAATTATTCCCAAAATTCAGGTGATGGCTCGATCCTCACCTCTAGATAAGCACACCCTGGTCAAGCATTTGCGGACCACCTTTGATGAAGTTGTTGCAGTTACTGGTGATGGAACAAACGATGCTCCTGCGCTTCATGAAGCAGATATTGGACTAGCAATGGGCATTGCTGGAACAGAGGTCGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACTATCGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTCGTGCAATTCCAGCTGACTGTCAACATTGTGGCGTTGATTGTGAACTTCTCTTCAGCTTGTTTGACAGGTAATGCACCCCTTACTGCAGTCCAGCTGTTGTGGGTGAACATGATTATGGACACACTTGGAGCTTTGGCTCTTGCCACTGAGCCTCCGAATGATGAGTTGATGAAGCGCTTACCCGTTGGAAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGAAATATCTTGGGGCAGTCCGTGTATCAGCTCTCAGTGATATGGTTTTTACAGGCCAAAGGGAAAGAAGCGTTTGATCTAGACAGCACTGATTCTGATCAGATACTGAATACCCTCATCTTCAATTCCTTTGTGTTCTGTCAGATTTTTAACGAAATAAGTTCCAGGGAGATGGACAAAATCGATGTCTTTCGAGGCATGCTTAATAACTATGTGTTTGTTGCTGTCATTGGTTCCACCGTTCTGTTCCAAATACTAATCATCGAATTTTTGGGAACATTTGCAAGCACCACCCCTCTGACTTCGTCGGAGTGGCTGTTTAGCGTGGTGGTTGGATTTCTAGGCATGCCCATTGCTGCTTTCTTGAAGACTATTCCAGTATAA 3045 43.35 MERFLDENFGGVKPKNSSDEVLQKWRDLCGVVKNPKRRFRFTANLSKRGEAAAMRQSNQEKLRVAVLVSKAAFQFIQGMQPSDYNVPEDVKAAGFHICADELGAIVEGHDPKKLKHHGGVEGIAQKLCTSTTTGLNGDADALNRRQEIYGVNKFAESEQRSFLVFVWEALQDMTLMILGLCAIVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNDYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVSAESPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFAVLVQGLVSQKLREGTHWNWSGDDALEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTITTNHMTVVKSCICMNVKESSNNPSSFCSDLPSSVVKLLLQSIFNNTGGEVVINKNGKRELLGTPTETALLEFGLSLGGDFQAERQAGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEAVPLDETSTKHLNVIIDQFAGEALRTLCLAYMELENGFSVNDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKTQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGSFISNVMWRNILGQSVYQLSVIWFLQAKGKEAFDLDSTDSDQILNTLIFNSFVFCQIFNEISSREMDKIDVFRGMLNNYVFVAVIGSTVLFQILIIEFLGTFASTTPLTSSEWLFSVVVGFLGMPIAAFLKTIPV 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2892947 2897443 - Carg18546-RA Car07g00570 151804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00570 1014 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Car07g00570 1014 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
Car07g00570 1014 Pfam E1-E2 ATPase 237 431 - -
Car07g00570 1014 Pfam haloacid dehalogenase-like hydrolase 737 793 - -
Car07g00570 1014 Pfam Cation transport ATPase (P-type) 513 591 - -
Car07g00570 1014 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Car07g00570 1014 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00570 Car-Chr7:2892947 Car12g00873 Car-Chr12:8608357 0 dispersed
Car14g00494 Car-Chr14:2712837 Car07g00570 Car-Chr7:2892947 2.89E-08 transposed
Car01g01394 Car-Chr1:12157382 Car07g00570 Car-Chr7:2892947 0 wgd
Car12g00547 Car-Chr12:3620443 Car07g00570 Car-Chr7:2892947 5.87E-59 wgd
Car03g00827 Car-Chr3:6730670 Car07g00570 Car-Chr7:2892947 0 wgd
Car07g00570 Car-Chr7:2892947 Car09g00244 Car-Chr9:1342769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00570 K01537 - csv:101212315 1856.26