Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00574 ATGAATATCATTCCTTATATTCGGAAGTACGGTAAAAATCCTGTTACTGGAGCTCCCCTGAAGCAGGAGGATCTTATTCCTCTGATTTTCCACAAGAACTCTGAAGGTGAGTTCCAGTGCCCTGTACTAAACAAAGTTTTTACCGAGTTCACTCACATAGTTGCTATAAAGACCACTGGAAATGTTTTCTGCTACGAGGCAATTAAAGAACTAAATATCAAGACAAAAAACTGGAAGGAACTTCTCACTGATGAACCATTTAGTAGGGAAGATATTATAACCATTCAGGTAAAAGGTGCTGATTTGCAGAACCCTACTGCACTTGATAGTAAGGTTCTCCTGGATTTTGATCATGTGAAAAAAAGCCTGAAAGTTGATAATGAAGAACTTCAGAAAATGAAATCAGATCCAACATATAACATAAATGTGTCGGGGGACATCAAGCAGATGTTGAAGGAACTTGGAACAGAAAAAGGAAGGCAAACTGCACTTCATGGGGGAGGTGGTGGCAAGGCACAGAAAGAAAGGGCAGCTGCCCTTGCTGCAATTTTAGAAGCTAGGTCACGCATCAAAGAAAATTCCAAGGAAAATGCAAAAGGAGAGGAGACACCTACTCAGGCATTTAGTATTGTGGATGCTGCATCTGCTTCAGTACATGGAAGAAGTGCAGCTGCTGCGAAAGCTGCTCCTAGTGAAAAAACTGCAGCTCGAATTGCCATGCACATGGCGGGTGAGAGGGCACCAGTGAATGCTAAGATGGTAAAGAGTCGTTACACTACTGGGGCTGCATCTCGATCCTTTACATCTACATCTTACGATCCTGTTACAAAGAATGAACACGAATATATCAAGGTTGAGAAAAATCCAAAGAAGAAAGGATATGTACAGTTGCACACAACTCATGGAGATTTGAATATTGAGCTGCATTGTGATATTACTCCAAGGGCATGTGAGAATTTCATCACACTTTGTGAAAATGGCTACTACAATGGAGTAGCTTTTCATAGAAGTATTAGGAATTTTATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGAGGTGAATCTATATGGGGAAAGCCCTTCAAAGATGAACTCAACTCCAAGTTGCTTCATTCTGGAAGGGGAATTGTCAGTATGGCAAATAGTGGTCCCCACACTAATGGTTCCCAGTTCTTTATTCTATACAAATCTGCCAATCATTTAAACTTCAAGCATACTGTATTTGGCGGTGTTGTTGGTGGTTTGACTGCTTTGGCAGCTATGGAAAAGGTTCCTGTTGATGACAATGATCGGCCGCTGGAGGAGATCAAGATTACAAGTGTCACAGTCTTCGTCAATCCATACTCGGAACCCGATGAAGAAGAAGAAAACAAGCAAAAAGACGAGAAGAATGTTGAAGATGAAGAAAACGATAAGGTTGGATCATGGTATAGCAACCCAGGCACCGGGGTAGCTGAAAATGGAGCTGCAGGTGGCGGTGTAGGGAAATACCTGAAAGCAAGGAATGCCCAATCCAAACCCCCTGCTGTTGATGCTAATCTAGGAGCAACTACCTCGACCAAGAAAAGGACAGCTGCAGGAGAGTTCAAAGACTTCTCTTCGTGGTAA 1614 42.38 MNIIPYIRKYGKNPVTGAPLKQEDLIPLIFHKNSEGEFQCPVLNKVFTEFTHIVAIKTTGNVFCYEAIKELNIKTKNWKELLTDEPFSREDIITIQVKGADLQNPTALDSKVLLDFDHVKKSLKVDNEELQKMKSDPTYNINVSGDIKQMLKELGTEKGRQTALHGGGGGKAQKERAAALAAILEARSRIKENSKENAKGEETPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAGERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLLHSGRGIVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVPVDDNDRPLEEIKITSVTVFVNPYSEPDEEEENKQKDEKNVEDEENDKVGSWYSNPGTGVAENGAAGGGVGKYLKARNAQSKPPAVDANLGATTSTKKRTAAGEFKDFSSW 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2908569 2912762 + Carg18550-RA Car07g00574 151808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00574 537 ProSiteProfiles U-box domain profile. 1 45 IPR003613 GO:0004842|GO:0016567
Car07g00574 537 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 298 445 IPR002130 GO:0000413|GO:0003755
Car07g00574 537 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 294 445 IPR002130 GO:0000413|GO:0003755
Car07g00574 537 MobiDBLite consensus disorder prediction 448 537 - -
Car07g00574 537 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 329 346 IPR020892 GO:0003755|GO:0006457
Car07g00574 537 MobiDBLite consensus disorder prediction 453 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00961 Car-Chr6:7390403 Car07g00574 Car-Chr7:2908569 1.64E-56 dispersed
Car07g00574 Car-Chr7:2908569 Car14g01795 Car-Chr14:14033684 7.89E-51 dispersed
Car01g01337 Car-Chr1:11892010 Car07g00574 Car-Chr7:2908569 7.11E-45 transposed
Car03g00830 Car-Chr3:6747321 Car07g00574 Car-Chr7:2908569 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00574 K10598 - csv:101204462 916.761