Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00575 ATGGATACCTTGTTTCGGCTTGTCAATCTTCAGTCCGAACAATCTTACAACTCCAGTAGAAGTAGAACCAATTCTAGCAGCTCCAGATCGTCTAGACAAAACCAATATCATTACCATCAACAGGAAGACGAAGAATGCTACAACGTTCTCATGGATGAGGAAGATTTCTCATCGTCTAGTAATTCTAGACAATACTACAATCCTTACCTTCCCAACCCATCTTCCACCGTCTGCACCACGCCCACCGCCACCACCCCAACCCCGATCGATCAATTCTCATTCGTCTCCCCCGCTCCGGATTTCAACTTCGAATTTTCCGGCAGGTGGGCCCCTGATATTCTCCTGGAAACCGCCAGGGCCATTTCTGACAGGAATAGTGCTCGTGTTCAGCAGCTGATGTGGATGCTAAACGAACTTAGCTCCCCCTATGGGGATACGGATCAAAAGCTAGCTGCCTATTTCCTGCAGGCCTTGTTTACCCGCATGACTGATTCCGGCGACCGTAATTATCGCGCTTTGTCCTCCGCCTCAGAGAAATCATGCTCATTCGAATCAACTAGGAAAATGATGCTCAAGTTTCAGGAGGTTAGTCCCTGGACCACTTTTGGGCATGTTTCTTGCAATGGCGCATTAATTGAAGCCTTAGAAGGCGAATCAAAGCTACACATAATCGATATCAGTAACACGTATTGCACTCAGTGGCCCACTTTGCTAGAAGCCCTCGCGACTCGTACCGACGATACGCCCCACCTACGCCTCACAACTGTCGTCATCACTAAGCCCGGCGATGGAAGTGGAGTAGCCGCATCTCAAAAAGTAATGAAGGAAATAGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTCAAATTCCACACGCTATACCATTCCGGTGACCTTTCAGATTTGGACTTGGCGAAATTAGACATCAAAGAAGACGAGGCACTCGCCGTCAACTGCATCGGAGCGTTACATTCCGTGGCGGCAGTTGATAACCGCCGAGATTTCTTGATTGCATCTTTCCGCAGTTTACGGCCGCGGATAATCACAGTGATAGAAGAGGAAGCCGACCTCGACGTAGGCGTCGATGGGATTGAATTTCTGAGTGGGTTCCAAGAATGTCTGCGTTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCACGAGGACAAGCAACGAGCGGTTGATGCTTGAGAGAGCAGCCGGTAGGGCAATCGTGGACCTGGTGGCTTGCTCGGCAGCGGAGTCGGTGGAGAGAAGGGAATCGGCAGCGCGGTGGGCACAGCGGTTGCATGGAAGCGGTTTCAGTCCGCTGATATTCAGCGACGAAGTATGCGACGACGTAAGGGCACTATTGAGGAGGTACAAGGAAGGGTGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAAACCTTGA 1479 50.51 MDTLFRLVNLQSEQSYNSSRSRTNSSSSRSSRQNQYHYHQQEDEECYNVLMDEEDFSSSSNSRQYYNPYLPNPSSTVCTTPTATTPTPIDQFSFVSPAPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFTRMTDSGDRNYRALSSASEKSCSFESTRKMMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVITKPGDGSGVAASQKVMKEIGTRMEKFARLMGVPFKFHTLYHSGDLSDLDLAKLDIKEDEALAVNCIGALHSVAAVDNRRDFLIASFRSLRPRIITVIEEEADLDVGVDGIEFLSGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRAIVDLVACSAAESVERRESAARWAQRLHGSGFSPLIFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWKP 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2915594 2917072 + Carg18551-RA Car07g00575 151809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00575 492 MobiDBLite consensus disorder prediction 15 41 - -
Car07g00575 492 Pfam GRAS domain family 113 491 IPR005202 -
Car07g00575 492 ProSiteProfiles GRAS family profile. 101 491 IPR005202 -
Car07g00575 492 MobiDBLite consensus disorder prediction 15 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00371 Car-Chr2:2760947 Car07g00575 Car-Chr7:2915594 0 dispersed
Car03g00840 Car-Chr3:6801737 Car07g00575 Car-Chr7:2915594 3.97E-55 dispersed
Car07g00575 Car-Chr7:2915594 Car08g00174 Car-Chr8:1056709 1.83E-149 dispersed
Car08g00679 Car-Chr8:4354654 Car07g00575 Car-Chr7:2915594 2.28E-42 dispersed
Car19g00735 Car-Chr19:8286139 Car07g00575 Car-Chr7:2915594 3.02E-55 dispersed
Car07g00575 Car-Chr7:2915594 Car07g00583 Car-Chr7:2961944 5.42E-58 proximal
Car03g00831 Car-Chr3:6753922 Car07g00575 Car-Chr7:2915594 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3850 PF03514 GRAS 2.40E-103 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00575 - - csv:101204711 848.58