Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00582 ATGAGCTGCAACGGTTGCCGCGTTCTCCGAAAGGGCTGCAGTGAGTCCTGTATTCTCCGCCCTTGCTTGCAGTGGATTGACACCTCTGAAGCCCAAGGCCACGCTACTGTCTTTGTCGCTAAGTTCTTCGGCCGCGCCGGTCTTATGTCTTTCATCTCCGCCGTCCCTGAATCTCAACGACCTTCTTTGTTTCAGTCTTTGCTGTTTGAAGCCTGTGGTCGTACTGTCAATCCGGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGAAACTGGCATATCTGTCAGGCGGCGGTGGAGACTGTGTTACGAGGCGGTACGTTGCGGCCGATGAATGAGTTTCTCGCCGCTGGATCTCCTAATCCGGCTTCCGATGAAACGTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTTCGAGATTCTTATCCAAATTCTCGATTCTCCAACTCCCGATCCAGACTCTCCCCAAAACGTAAACGATCCGAGGAATCCACTAAAAACAAACTGAACGACTTAGATCTCCGTTTAACACCGACTTTTCCGGCCAAATCAACCCGGCGTGCCGCTACTCCGTCAATGAATTCCGAGGAATCCGAAACCACTACGTGTTTTGAAAGCGGCGGCTTAATTGATCATCATCATCGCCACTACCATCCAGAAGAACTGGTACCGGAACGGAAACTTCTCAATTTATTCGTCTAA 705 51.63 MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2957023 2958187 + Carg18558-RA Car07g00582 151816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00582 234 MobiDBLite consensus disorder prediction 184 202 - -
Car07g00582 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Car07g00582 234 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Car07g00582 234 MobiDBLite consensus disorder prediction 156 171 - -
Car07g00582 234 MobiDBLite consensus disorder prediction 144 202 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00839 Car07g00582 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00582 Car-Chr7:2957023 Car14g00743 Car-Chr14:4170324 5.38E-54 dispersed
Car01g01399 Car-Chr1:12199842 Car07g00582 Car-Chr7:2957023 3.75E-63 wgd
Car03g00839 Car-Chr3:6795366 Car07g00582 Car-Chr7:2957023 1.04E-154 wgd
Car07g00582 Car-Chr7:2957023 Car09g00237 Car-Chr9:1307442 2.85E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3853 PF03195 LOB 1.90E-25 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00582 - - csv:101206615 401.749