Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00583 ATGAATAATCAAAGCCCAATTACAGTCCCTCGACGCCGCCCATGGCCTGGATTGTTCGCGTCTTCTTCTTCTTCTTCTTCTTCCTCCAAAGCTTTGGGAACTTGGTTGGGTGAGGACGCCAATTGCATGGAACACTTGTTGGTCCACTGCGCCAACGCTATTGAATCCAACGACGCTACTCTCGCCCAACAAATCCTTTGGGTCCTCAACAACATTGCCACTCCTGATGGCGACTCCAACCAACGCCTTGCCTCTGCTTTCCTACGCGCTCTTGTAACACGCGCTGCCAACATTGGCAGCTGTAAAATCCTCGCTGCCATCACCACCGCAGCTACCTCCTCCCTCACTACTCACTCCTTCTCCCTCATGGACCTCGCCGCCTTCGTCGACTTAACCCCCTGGCATCGCTTCGGCTTCACGACCGCAAATGCGGCGATTCTCGACGCCATCGAAGGCTACTCTGCCGTCCATGTCGTCGATTTCAGCTTGATGCATTGCATGCAAATCCCCACTCTCATCGACGCGATCGCTACTCGTTTCAAGTTCCCCCCTCTACTCAAACTCACCACGGTTGTCGTAAAACACGTGCCGCCCTTGCTCGAGCTGTCGTACGAGGAATTAGGAGCGAAATTGGTGAATTTTGCAAGGTCAAAAAACGTGAGAATGGAATTTAGATTTGTGGAGTCTTGCTACACCGATGGATTTTCCAATTTAATCCAAGAAATTCGAGTGCAAAATTTAATTTATGGACCCGAAAGTAAGGAAGCGCTGATTTTAAACTGTCACATGATGCTTCATTACATCCCTGAAGAGACATTAAACCCAAACCCATCTCCCAATTTCGACATGTCGTCTTCAACTCGTTCGATGTTTCTCAAGGAAATCCGAAGCTTAGAGCCAGCGATTGTGATTCTAGTCGATGAGGAAGCCGATTTCACGGCGAGTGAAATGGTGAGTCGATTGAGATCGGCGTTTAATTACTTATGGATACCGTACGACTCGATGGATTCGATTCTTCCGAGGAACAGCAAGCAGAGGGAATGGTACGAGGCCGGGATTTGTCGGAAGATTGAGAATGTGATTGCTGAGGAAGGGATTGAGAGAGTGGAACGATTGGAGCCGAAGACGCGGTGGGTTCAACGGATGCTGAACTCCAAATTCCGAGGGGTTGGGTTCGGAGACGACGCGGTTTCGGAGGTGAAGACGATGCTCGACGAGCATGCAGCGGGATGGGGGTTGAAGAAGGAAGACGACCACCTCCTCCTCACGTGGAAGGGCCACGACGTCGTTTTCGCCACGGCTTGGGTACCTTGCTAA 1317 50.87 MNNQSPITVPRRRPWPGLFASSSSSSSSSKALGTWLGEDANCMEHLLVHCANAIESNDATLAQQILWVLNNIATPDGDSNQRLASAFLRALVTRAANIGSCKILAAITTAATSSLTTHSFSLMDLAAFVDLTPWHRFGFTTANAAILDAIEGYSAVHVVDFSLMHCMQIPTLIDAIATRFKFPPLLKLTTVVVKHVPPLLELSYEELGAKLVNFARSKNVRMEFRFVESCYTDGFSNLIQEIRVQNLIYGPESKEALILNCHMMLHYIPEETLNPNPSPNFDMSSSTRSMFLKEIRSLEPAIVILVDEEADFTASEMVSRLRSAFNYLWIPYDSMDSILPRNSKQREWYEAGICRKIENVIAEEGIERVERLEPKTRWVQRMLNSKFRGVGFGDDAVSEVKTMLDEHAAGWGLKKEDDHLLLTWKGHDVVFATAWVPC 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2961944 2963260 + Carg18559-RA Car07g00583 151817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00583 438 MobiDBLite consensus disorder prediction 1 28 - -
Car07g00583 438 Pfam GRAS domain family 43 435 IPR005202 -
Car07g00583 438 ProSiteProfiles GRAS family profile. 34 436 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00583 Car-Chr7:2961944 Car19g00735 Car-Chr19:8286139 2.04E-113 dispersed
Car07g00575 Car-Chr7:2915594 Car07g00583 Car-Chr7:2961944 5.42E-58 proximal
Car03g00840 Car-Chr3:6801737 Car07g00583 Car-Chr7:2961944 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3854 PF03514 GRAS 5.30E-94 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00583 - - cmos:111453455 694.501