Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00606 ATGCAACAAAGCTTGAGAATGATGGAGAAAATGGTAAACGATGAATTTCCGAACTCTTTCCTCCAAATCCCGCTCGCCGGATCCAACCCTTTTTCGGCCAAGAAGAAGCGCAACCACCCCGGAACGCCCGATCCCGACGCGGAAGTCATAGCGCTGTCGCCCAAGACACTGATGGCCATGAACAGATTCGTGTGTGAAATATGTGGGAAAGGGTTTCAAAGAGACCAAAACTTGCAGCTCCATAGACGAGGACATAACCTTCCATGGAAGCTGAAGCAAAGAAGCAACAAAGAGGTGAGGAAGAGAGTGTATGTGTGCCCTGAAACCAGCTGCGTGCACCACCATCCATCCAGAGCGCTGGGGGATCTCACCGGGATTAAGAAGCACTTTTGTAGAAAGCATGGCGAGAAGAAGTGGAAGTGTGAGAAGTGCTCTAAGAGATATGCTGTTCAGTCTGATTGCAAAGCCCACTCCAAAACTTGTGGCACTAAAGAGTACAAATGTGGCTGTGGTACTCTATTTTCCAGGAGAGACAGCTTCATTACTCACAGGGCTTTCTGCGATGCATTAGCTGAAGAAACAGCGAGAGTGAACGCCGCCACTACAATAACAGCCGCCATGACCGCCGCCGGCAATTTCAATTGCAATTTCATGGCCGGAGTCACAGAACCACCATTCATGCCTTCAATTTTCAGCTGCAATGGCCTCTCCTCACGAACCAACAACAACAACAACAACAGCAATCTACACCCACTTCCCCAAATTAATTCAGGGCTAATGTACTGTGACCCTTTATTAAATTCTTGCCACGCGCCGCCACCAGCTGACTACAATCTGAATTGGGTATTTGGAACAAAGGGTAATAATTCAGTTCAAAATCCGCCGTTGATGAGTGGCGGTGGTGGTGGCGGTGTTTCTTCACTGTACAGCCACCAATTACAGCAAGTGAATCAAACCCACATGGCTAACATGTCAGCCACTGCTTTGCTGCAGAAAGCTGCTGAAATTGGGGCAAATTCCAGCTCGGATCCACCATTTTTTCAAGAGGGTTTTGTGTTCAAATGCAGCGGCGGTACAGTTCAAAATGGGAGTGAATTTTCAAATTCTGCTACTCAAATCCCAATTATGGCGAATGAGAATGAGATGTACACTGCAAAACGGCGTCGTACTCAGAGTGAATTCATGGGAAGTGGAAGTGGGTTCACAGGAGGAGGGCAGACAAGGGATTTTCTTGGAGTTGGTGCCAACACCATTTGCCACACTTCATCCATTAATGGATGGATTTAG 1287 47.63 MQQSLRMMEKMVNDEFPNSFLQIPLAGSNPFSAKKKRNHPGTPDPDAEVIALSPKTLMAMNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVRKRVYVCPETSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDCKAHSKTCGTKEYKCGCGTLFSRRDSFITHRAFCDALAEETARVNAATTITAAMTAAGNFNCNFMAGVTEPPFMPSIFSCNGLSSRTNNNNNNSNLHPLPQINSGLMYCDPLLNSCHAPPPADYNLNWVFGTKGNNSVQNPPLMSGGGGGGVSSLYSHQLQQVNQTHMANMSATALLQKAAEIGANSSSDPPFFQEGFVFKCSGGTVQNGSEFSNSATQIPIMANENEMYTAKRRRTQSEFMGSGSGFTGGGQTRDFLGVGANTICHTSSINGWI 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3065072 3067250 + Carg05125-RA Car07g00606 151840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00606 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Car07g00606 428 MobiDBLite consensus disorder prediction 27 46 - -
Car07g00606 428 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00606 Car-Chr7:3065072 Car11g01486 Car-Chr11:11999270 3.87E-107 dispersed
Car07g00606 Car-Chr7:3065072 Car08g00290 Car-Chr8:1858058 8.61E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3856 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00606 K25870 - csv:101211656 490.73