Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00626 ATGTCTTTGAACTGCAAGTTTTCTATCTTTAATGGAAAGTTTCCAGCTGGGTTTAAGCTGAAGAAGGCTAAGGAACATCTATGTTTGTTAAATTCCACCGGAAAATGGAAGAAGAAGCTGTTCTGTCTTTGGATTTTTACTGTCGTTTTAGCTTTGGGGAGCTGGTTTTCCTTGCGTTCGTGTAATGTGAATAGTGGAACAAGACAGAAAACCTCGGACTTGTTCGATGAAGAAACTCAAACTTTGATGCGGCATTTCAATGTAAGCAAGAATCAGATTCAAGCTTTGACTGCCTTGTTTTCTGAATCAGATTGGATGACATCCATGGGGTGCATCAATGATTTTGGATCTGACAAATCACAGTTGGATGGAATTGCCTGTGCCCTGAGGTCACTGTACTGGGAGCAAGATTTGCACAAGCAGCATGTATGGGTTGAGGGAAGTGCAGATTCCAATGTTGGGCAGTGCCCAATTCGAACTGAGAAGGTCCCTGAAAATTCTGAACAATTATTCTCTGAGGACATAACTGTTCCATATGCTACAGACTTATCTGTCTCTTTACTTTCTTCTGGAAATCAGCTCTGTGGAAAGATAATTGAACAAACAGGAGTTCTAAGATACTTTATAAGAAAGCACTGGAAGGGTTTCTATAGTTTGTTGATTGGATGTTTTTCAGTCTTTCTTGGAGTGATATCATTCCAGAAAACATCTGGTTTCCATCTAAACTTGTGGAACAAAAAACATCGAAAGCCAAATCAGCCATTGGTTCATCCACAATGGGTCTTACAACGGAGAAAAAAGCATCAACAAGTCAAAGATTCTTCTAAAGGAGCAGGGAAATGGCGGAAGGTGCTCCTAAGAATATTTATTGTATTCGGAATAATCGGGTCCATATGGCTATTTTGGTACCTGAACAAGACAGCCATTTTGAGAAGAGAAGAAACACTTGCAAACATGTGTGATGAGCGAGCTCGGATGTTGCAGGACCAGTTTAATGTTAGCATGAACCATGTTCATGCATTGGCCGTTCTTACCTCGACGTTCCACCATGGAAAACAACCTTCAGCTATTAATCAGAAAACATTTGGTGAGTATACAGAAAGAACATCCTTTGAAAGACCACTAACTAGTGGTGTAGCTTATGCTTTGAAAGTTAATCACTCGGAAAGAGAGCAATTTGAGAGGATGCATGGATGGACAATAAAGAAAATGGAGACAGAGGACCAAACTCTTGTTCAAGATTGTAACCCAGAAAATTTGGAGCCTGCACCAATTCAAGACGAATATGCACCTGTCATATTTTCTCAAGAAACGGTCGCTCATATAGTTTCTATCGACATGATGTCTGGAAAAGAAGATCGTGAGAACATATTGCGAGCTAGAGCTTCTGGAAAGGGAGTGCTTACATCTCCTTTTAAGCTTTTGAAATCTAATCACCTTGGAGTCGTCCTCACGTTTGCCGTCTATGACACTGACCTCCCGCCAGATGCTACTCCTGAGCAACGTATCGAAGCTACTGTTGGTTATCTAGGTGCATCTTATGATATCCCCTCACTGGTGGAAAAGCTTCTGCATCAGCTTGCTAGTAAGCAGACAATTGTTGTGAACGTTTATGATACGACCAATCATTCCGCTCCCATTAATATGTATGGTTCGGATTTTTCCGATACTGGGCTACTGCATATTAGTAAACTTGATTTTGGGGATCCATTAAGAAGGCATGAGATGCATTGTAGATTCAAGCATAAACCTCCACCTCCTTGGACAGCCATCAATTCATCGGTTGGCGTCCTTATCATTACCTTGCTGGTTGGGCATATTTTTCATGCAGCCATAAGTCGGATCGCAAAAGTGGAGAATGACTATCACGAGACGATGTGGCTTAAAAGTCTTGCCGAAGCTGCTGATGTCGCAAAATCACAGTTTCTGGCAACAATTTCCCATGAGATCAGAACACCAATGAATGGTGTTTTAGGCATGCTGAAATTACTGATGGACACTAACCTTGATCCGAATCAACTGGATTTTGCCCGGACTGCTCACGAGAGTGGAAAAGATCTGATATCTCTTATAAATAAGGTTCTTGATCAAGCTAAGATAGAATCAGGAAGGCTTGAACTTGAATCTGTACCTTTTGATCTGCGTGCTATACTTGATAATGTTCTCTCACCTTTCTCTCTCAAATCCAATGATATGGGAATTGAGTTGGCTGTTTATGTCTCTGATTTGGTGCCTGAAGTTGTCATCGGTGACCCTGGACGTTTTCGTCAAATAATTACTCATCTCGTTGGAAACTCGGTCAAGTTTACTCATAAAAAGGGACACATATTAGTCTCAGTGCATCTGGCTGATGAAGTGAGAGGCCCAGTTGATTTTATGGACATTGTGCTTAGACAAGGCACGTACTTAGCTGGAGATGCATCAAAGAATGGTTCTACTACATTCAGTGGGTTACCTGTGGTGAATAGATGGAAAAGCTGGGAGGATTTCAAAAAGTTCAGCAATACAAATGCGGTGGAGGAACCCAAAACTATTAAAATACTCGTGACCGTTGAGGATACAGGTGTAGGAATTCCCCGAAAAGCACAAAGCCGAATTTTCACTTCTTTTATGCAGGCTGATAGTTCCACTTCACGGATATATGGTGGCACTGGAATAGGATTGAGTATTAGCAAACGTTTGGTCGATCTCATGGATGGGGAGATCGGGTTTGTGAGTGAGCCTGGTATAGGTAGCACGTTTTCATTTACGGTTTCTTTTCAGAAAGGGGAAACAAATTTTCTGGATACGAAACGGTCACAGTTTGATCTCGGTGTTATGGAGTTCCAGGGGCTAAGAGCTTTAATAATAGATAATAGCTGCATTCGAGCTGAGGTCACGAGATATCATCTGCAGAGGCTTGGGATTTCTGTTGATATAGCTCTGAGTGCAGAATCTGCTTATCAGTATTTATCTAATACTTCCAACACAAGAGTATCGACGCAATTAGCCATGATTCTTATAGACAAAGATATTTGGGACAAGAAAGTGGGTCTGAAGTTCCATCTTCTGTTTAAAGAGCACGTTGATAGAAGTGTGACAAATCTCCAGATGAATACTCCAAAGCTTTTTCTTTTGGCGAACCCCATTAGCTTCAATGAGCTGAATGAACTTAAATCTTCAGGTCATGTAAATAATGTATTGATTAAACCTCTTCAGCTAAACATGTTGGTTAGTTGCTTCCACGAAGCGTTTGGGATCGAGAAGCGGAATCAAGTAGTAATTAAAAGACCTTCTACTCTTAAGAACCTGCTGAAAGACAAGCATATTTTGGTTGTGGATGACAATGCGGTTAACAGAAGGGTGGCAGAAGGTGCCTTGAAGAAATATGGAGCTGTTGTAACTTGTGTAGAATGTGGAAAGGATGCGGTGGCTCTCCTCGACCCTCCACACAACTTTGATGCTTGTTTCATGGACCTCCAGATGCCTGAGATGAATGGGTTTGAAGCTACAAGACAGGTCCGTGCTGTAGAAAGAGGGGTAAACGAGAAACTTACATCAGGAGAAGTGTCAACTGAGGACAATAAGGTTTATTGGCACACACCAATATTTGCTATGACGGCAGATTTAATTCAGTCTCTGTATGAACAGTGCCTGAAGTGTGGGATGGATGGTTATGTAGCTAAGCCATTTGAAGAAGAGCAACTTTATTCAGCTCTAGCATGCTATTTCGAGACTACTTGA 3723 41.45 MSLNCKFSIFNGKFPAGFKLKKAKEHLCLLNSTGKWKKKLFCLWIFTVVLALGSWFSLRSCNVNSGTRQKTSDLFDEETQTLMRHFNVSKNQIQALTALFSESDWMTSMGCINDFGSDKSQLDGIACALRSLYWEQDLHKQHVWVEGSADSNVGQCPIRTEKVPENSEQLFSEDITVPYATDLSVSLLSSGNQLCGKIIEQTGVLRYFIRKHWKGFYSLLIGCFSVFLGVISFQKTSGFHLNLWNKKHRKPNQPLVHPQWVLQRRKKHQQVKDSSKGAGKWRKVLLRIFIVFGIIGSIWLFWYLNKTAILRREETLANMCDERARMLQDQFNVSMNHVHALAVLTSTFHHGKQPSAINQKTFGEYTERTSFERPLTSGVAYALKVNHSEREQFERMHGWTIKKMETEDQTLVQDCNPENLEPAPIQDEYAPVIFSQETVAHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYDTDLPPDATPEQRIEATVGYLGASYDIPSLVEKLLHQLASKQTIVVNVYDTTNHSAPINMYGSDFSDTGLLHISKLDFGDPLRRHEMHCRFKHKPPPPWTAINSSVGVLIITLLVGHIFHAAISRIAKVENDYHETMWLKSLAEAADVAKSQFLATISHEIRTPMNGVLGMLKLLMDTNLDPNQLDFARTAHESGKDLISLINKVLDQAKIESGRLELESVPFDLRAILDNVLSPFSLKSNDMGIELAVYVSDLVPEVVIGDPGRFRQIITHLVGNSVKFTHKKGHILVSVHLADEVRGPVDFMDIVLRQGTYLAGDASKNGSTTFSGLPVVNRWKSWEDFKKFSNTNAVEEPKTIKILVTVEDTGVGIPRKAQSRIFTSFMQADSSTSRIYGGTGIGLSISKRLVDLMDGEIGFVSEPGIGSTFSFTVSFQKGETNFLDTKRSQFDLGVMEFQGLRALIIDNSCIRAEVTRYHLQRLGISVDIALSAESAYQYLSNTSNTRVSTQLAMILIDKDIWDKKVGLKFHLLFKEHVDRSVTNLQMNTPKLFLLANPISFNELNELKSSGHVNNVLIKPLQLNMLVSCFHEAFGIEKRNQVVIKRPSTLKNLLKDKHILVVDDNAVNRRVAEGALKKYGAVVTCVECGKDAVALLDPPHNFDACFMDLQMPEMNGFEATRQVRAVERGVNEKLTSGEVSTEDNKVYWHTPIFAMTADLIQSLYEQCLKCGMDGYVAKPFEEEQLYSALACYFETT 1240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3153535 3164310 - Carg05147-RA Car07g00626 151860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00626 1240 ProSiteProfiles Response regulatory domain profile. 1102 1237 IPR001789 GO:0000160
Car07g00626 1240 Pfam His Kinase A (phospho-acceptor) domain 638 703 IPR003661 GO:0000155|GO:0007165
Car07g00626 1240 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 750 920 IPR003594 -
Car07g00626 1240 Pfam CHASE domain 356 550 IPR006189 -
Car07g00626 1240 Pfam Response regulator receiver domain 1103 1233 IPR001789 GO:0000160
Car07g00626 1240 ProSiteProfiles Response regulatory domain profile. 946 1078 IPR001789 GO:0000160
Car07g00626 1240 ProSiteProfiles CHASE domain profile. 353 577 IPR006189 -
Car07g00626 1240 ProSiteProfiles Histidine kinase domain profile. 645 922 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00626 Car-Chr7:3153535 Car11g01462 Car-Chr11:11820524 0 dispersed
Car20g00576 Car-Chr20:3233680 Car07g00626 Car-Chr7:3153535 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3860 PF03924 CHASE 9.80E-36 CL0165 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00626 K14489 - csv:101221294 2126.29