Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00646 ATGGCCGCTTGTTTCGCCGCTTCTCTCTCCTCTTCCATCTTCTTCTCTCTCCTCCTGTTAATCCATGGCTCTACAGTTCCGGGTGATCCGCCATTGAAGACCTTCATCTTCCGTGTGGACAGTTTCTCTAAACCCTCTGTTTTTCCCACCCATTTCCACTGGTACACTTCCGAGTTCGCCGAATCCCACAAAATCCTCCATGTTTACGACACCGTGTTTCATGGATTCTCTGCAACTTTCACTCAAGAGCAAGCCGATTCCGTCGGAAAACACCCTTCTGTGCTTGCTGTCTTTGAGGACCGTCGCCGTCAGCTTCACACCACGCGTTCCCCTCAATTTCTCGGCCTTCGAAACCAGCGTGGTTTGTGGTCTGATTCCGATTATGGGTCGGATGTAATCATTGGAGTTTTCGATACTGGGATTTCCCCTGAACGGCGGAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAAGGGGTTTGTCAGACTGGAACTAAGTTCACGGCCAAAAACTGTAATAGGAAGATCGTCGGTGCGAGGTTTTTCTCTAAGGGTCACGAAGCAGGGGCCAACGCTGCTGGTCCGATTATTGGGATTAACGACACCGTTGAGTACCGATCTCCGAGAGACGCCGACGGCCATGGGACTCACACGGCATCGACGGCGGCTGGGCGTCACGCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCGGGAATCGCGAAGGGTGTAGCCCCTAAGGCACGTTTGGCGGTTTACAAAGTTTGTTGGAAAAATTCGGGTTGTTTCGATTCCGATATTCTCGCGGCGTTTGATTCTGCTGTTAAGGACGGCGTCGATGTCATTTCGATCTCGATAGGTGGCGGCGATGGCGTTTCCACGCCGTATTATCTTGACCCAATTGCAATCGGGGCGTACGGCGCCGCTTCTAGGGGCATTTTCGTTTCGTCTTCGGCTGGCAATGATGGACCCAATGGGATGTCAGTAACGAACTTAGCGCCGTGGATTACGACGGTCGGAGCTGGTACGATTGACCGGAATTTCCCGGCGGTGGTGATTATGGGAAACCGACGGAAGATTCACGGCGTTTCTCTGTACGCCGGAGCGCCATTGAACAGTACAATGTATCCGTTGGTTTACCCTGGAAAATCAGGGGAGCTCTCTGCTTCACTCTGTATGGAGAGTTCGCTTGACCCTAAGATTGTGACCGGAAAAATTGTTATCTGTGACAGAGGAAGTAGCCCGAGAGTGGAGAAAGGTTTGGTGGTGAAGAAGGCCGGCGGCGTCGGAATGATTTTGGCGAACGGAATTTCAAACGGCGAAGGACTCGTCGGTGATGCCCATATCCTTCCCGCCTGCGCCGTTGGCTCTGTAGAAGGCGATGCCATGAAAGCCTACGCATCGTCCTCTGGAAATCCCACCGCCACCATCGCCTTCCGAGGCACAAGAATCGGAATCAAACCGGCGCCGGTGGTGGCTTCGTTTTCTGCAAGAGGGCCAAATGGATTAAACCCTGAAATTCTAAAACCGGACATGATCGCACCAGGGGTTAACATTTTAGCTGCTTGGACAGATGTCGTCGGCCCAACCGGTTTAGACTTCGATACACGAAAAACAGAGTTCAATATCTTGTCAGGTACATCAATGGCGTGTCCTCATATAAGTGGAGCCGCCGCTCTGTTGAAATCAGCACATCCCGATTGGAGTCCGGCGGCGGTAAGATCCGCCATGATGACCACCGCAAGAATCACTGACAACCGACGGCAGCCGACGACGGAAGAGTCCACCGGAAAAGCTTCTACACCGTATGATTTTGGTGCCGGTCATGTGAATCTCGGCCTCGCAATGGACCCTGGACTAGTCTACGACATTACAAACACCGATTATGTCAACTTCCTATGCTCAATCGGCTACGGAACGAAGATGATCCAAGTCATATCTCGAACGCCGGTGAAATGTCCGGCGAGGAAGCCATTGCCAGAGAATTTGAACTACCCATCAATCGTAGCCGTGTTTTCCAGTCTATCAAAAGGGTTGTCCACAAAATCGTTTATTCGAACGGCGACGAACGTGGGGGCGGCGAATTCGGTGTACCAAGCTAAAATCGAAGCTCCGAAAGGGGCAACGGTAAAGGTAAAGCCGTCGAAACTAGTATTCTCAACGGCGGTAAAGAAACAGAGCTTCGTAGTGGCCATATCAGCCAATGACCAGAATCTGACACTAGGCGATGTGGGTGCAGTCTTTGGTTCTCTTTCTTGGTCTGATGGAAAGCATGTGGTCCGAACACCACTGGTAGTTACTAAATTAGAGCCGTTGTAG 2325 51.83 MAACFAASLSSSIFFSLLLLIHGSTVPGDPPLKTFIFRVDSFSKPSVFPTHFHWYTSEFAESHKILHVYDTVFHGFSATFTQEQADSVGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCQTGTKFTAKNCNRKIVGARFFSKGHEAGANAAGPIIGINDTVEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDSAVKDGVDVISISIGGGDGVSTPYYLDPIAIGAYGAASRGIFVSSSAGNDGPNGMSVTNLAPWITTVGAGTIDRNFPAVVIMGNRRKIHGVSLYAGAPLNSTMYPLVYPGKSGELSASLCMESSLDPKIVTGKIVICDRGSSPRVEKGLVVKKAGGVGMILANGISNGEGLVGDAHILPACAVGSVEGDAMKAYASSSGNPTATIAFRGTRIGIKPAPVVASFSARGPNGLNPEILKPDMIAPGVNILAAWTDVVGPTGLDFDTRKTEFNILSGTSMACPHISGAAALLKSAHPDWSPAAVRSAMMTTARITDNRRQPTTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNTDYVNFLCSIGYGTKMIQVISRTPVKCPARKPLPENLNYPSIVAVFSSLSKGLSTKSFIRTATNVGAANSVYQAKIEAPKGATVKVKPSKLVFSTAVKKQSFVVAISANDQNLTLGDVGAVFGSLSWSDGKHVVRTPLVVTKLEPL 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3282729 3285053 + Carg05167-RA Car07g00646 151880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00646 774 Pfam Subtilase family 129 593 IPR000209 GO:0006508|GO:0008236
Car07g00646 774 Pfam Fibronectin type-III domain 664 768 IPR041469 -
Car07g00646 774 Pfam Peptidase inhibitor I9 48 106 IPR010259 -
Car07g00646 774 Pfam PA domain 378 464 IPR003137 -
Car07g00646 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Car07g00646 774 ProSiteProfiles Serine proteases, subtilase domain profile. 104 618 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00646 Car-Chr7:3282729 Car08g00711 Car-Chr8:4564134 0 dispersed
Car09g00079 Car-Chr9:398345 Car07g00646 Car-Chr7:3282729 1.81E-168 dispersed
Car05g00411 Car-Chr5:2337419 Car07g00646 Car-Chr7:3282729 1.94E-171 transposed
Car10g00574 Car-Chr10:2899243 Car07g00646 Car-Chr7:3282729 3.82E-07 transposed
Car16g00018 Car-Chr16:203184 Car07g00646 Car-Chr7:3282729 2.20E-158 transposed
Car20g00658 Car-Chr20:3717241 Car07g00646 Car-Chr7:3282729 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00646 - - csv:101217844 1369.37