Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00657 ATGGTATCTGATTATTCCCCTGATCAACGTGATTTGCAGTTCGCCACTAGGTTTTTGGTTCATTTTATGAGGTCTCAGCCTTTTCTTCTTGCTGTAGAGCTGCGTTGGCTGATATCTATAATGGAAGATGGCGAGCTTGAATCCTCGAATCCTGAAGTGTTTTCGAGTTCGAATGCCGTTGAGTTTCTGAGTAGCTGCTCGATGGATAGCTTCTTCGATGAGATTCTTAAGGATACTCATGCTTGCACGCATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCACACATGTTTTCATGTTCATACTAAAATTGTTTCCTCCCCTACCGAAGAAAAGGTTTCCACTGATGACACGGCGGAATCTGTGGATAAGAAGACTAAGAAACGCCCGCTAGGTAATCGCGAAGCGGTTCGTAAGTACCGTGAGAAGAAGAAGGCAAGAGCTGCATCATTGGAAGATGAAGTTGTGAGATTGAGGACCTTGAATCAGCAACTGTTGAAGAGACTGCAGGGTCAGGCTGCATTGGAGGCTGAGATTTCGAGGCTCAAATGTTTGCTTGTGGATATTAGAGGAAGAATTGAAGGGGAGATTGGAACATTTCCTTATCAGAAACCAGCCAATTCAGATCTTCCCAATCAAAATATGTCTGGTAGTTACATGATAAATCCCTGTAATGTGCAGTGCAATGATCAGCCGTATTGCCTTCATCCAGGGGCCGATGGAAAAAGTGGAGAGAGCGTTTTGTTGAACGGGCAAAGCTTCAGTGGCTGTGACTTTGAAAATCTTCAGTGCTCGGCTAATCAAAACACAGGAGGAACAAAGGAACTTCCTGATTGTGGATTAGGGGACACAGTTTCTAACATCAATTGCGCCGAATTTAATCAGAAGAAAGATTTTAAAGAGTTCGATACAGCACGAGGACTTGCCTCTTTCTGTCTTCAGCTACTAACAACTCTTTATATGATGCTCGCGGAGGAGGGGTCCGTAAGAAGTCCAGAAATGGGAAGAGCTGATCGTGGATGGTATCTGCATCCTTTCGTGTACATCATCAGCTACATCGGGTCGGTTCCTGCTCCGTCCAGTGCAGCATCAACATCCTCTTTCAGTCTCGGGTCTTGTTTGTTGTACTAA 1143 44.79 MVSDYSPDQRDLQFATRFLVHFMRSQPFLLAVELRWLISIMEDGELESSNPEVFSSSNAVEFLSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTAESVDKKTKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPANSDLPNQNMSGSYMINPCNVQCNDQPYCLHPGADGKSGESVLLNGQSFSGCDFENLQCSANQNTGGTKELPDCGLGDTVSNINCAEFNQKKDFKEFDTARGLASFCLQLLTTLYMMLAEEGSVRSPEMGRADRGWYLHPFVYIISYIGSVPAPSSAASTSSFSLGSCLLY 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3338708 3342159 + Carg05178-RA Car07g00657 151891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00657 380 Coils Coil 138 172 - -
Car07g00657 380 MobiDBLite consensus disorder prediction 113 140 - -
Car07g00657 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 127 174 IPR004827 GO:0003700|GO:0006355
Car07g00657 380 Pfam Basic region leucine zipper 127 182 IPR004827 GO:0003700|GO:0006355
Car07g00657 380 MobiDBLite consensus disorder prediction 117 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00657 Car-Chr7:3338708 Car16g00666 Car-Chr16:4226184 4.65E-06 dispersed
Car16g00620 Car-Chr16:3968604 Car07g00657 Car-Chr7:3338708 1.79E-130 wgd
Car19g00567 Car-Chr19:7158581 Car07g00657 Car-Chr7:3338708 4.15E-127 wgd
Car20g00651 Car-Chr20:3670644 Car07g00657 Car-Chr7:3338708 2.89E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3865 PF07716 bZIP_2 8.80E-15 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00657 K25785 - csv:101219501 477.248