Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00667 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGAACCGACATGTCCACAAAGGTTCAGATGCTGGTGGGCGACAGGATGGTCTCCTATGGTACAAGGATAGTGGACAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAAGCTAACAATTTACTTGAAGATCAAAGCCAGATAGAGTCAGGCAATTTGAGCTTGCACGAGTCGGGGCCATATGGTACCTTTGTTGGAGTGTATGATGGGCATGGAGGGCCCGAGACGTCGCGCTATGTTAACGATCACCTGTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCCGTGGATGTCATAAGAAAGGCCTTTCAAGCTACAGAAGACGGGGTCGTTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGCGATTCACGAGCTGTTTTAGGGCGAGTCGTGAAAGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCGGCCGAGCATAATGCATCTATAGAGTCTGTTCGGCACGAGCTACGTGCTCTGCATCCCGATGACCCCCAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGTCTTATACAGGTTTCTCGATCGATCGGCGATGTCTATTTGAAGAAAGCTGAATTCAACCGAGAGCCTCTTTATGCCAAGTTTCGCCTTCGTGAACCGATCACAAAGCCGATACTGAGTGCCGAACCATCTATTTCGGTGCTTCAGTTACAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAACCAGGAAGCTGTGGATATTGTCCAAAATCATCCACGTAGTGGAAGTGCAAGGAGGCTAGTGAAAGCAGCACTGCTAGAGGCAGCAAAGAAGAGAGAAATGAGATACTCCGACTTGAAGAAGATCGACCGTGGCGTACGGCGACATTTCCACGATGACATTACAGTGATTGTTGTGTTTCTCGACTCAAACCTCGTGAGCCGAGGTAGCTCTACAAAATGTGGAAGCGTATCCATACGAGGGGGCGGAGTTAACTTACGTCCAAACTCATTGGCCCCTTGCACCACGCCATCAGACCACAGCATGGCCTGA 1194 48.07 MFSELMNFLRACFRPRSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQIESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGVVAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRHELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPITKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRGSSTKCGSVSIRGGGVNLRPNSLAPCTTPSDHSMA 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3388579 3392496 + Carg05188-RA Car07g00667 151901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00667 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car07g00667 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Car07g00667 397 Pfam Protein phosphatase 2C 78 326 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00605 Car-Chr3:5617688 Car07g00667 Car-Chr7:3388579 0 dispersed
Car06g00288 Car-Chr6:1617533 Car07g00667 Car-Chr7:3388579 0 dispersed
Car07g00353 Car-Chr7:1775218 Car07g00667 Car-Chr7:3388579 0 dispersed
Car07g00667 Car-Chr7:3388579 Car14g00153 Car-Chr14:726511 0 dispersed
Car08g01149 Car-Chr8:7731068 Car07g00667 Car-Chr7:3388579 3.72E-154 dispersed
Car17g00347 Car-Chr17:2171435 Car07g00667 Car-Chr7:3388579 6.11E-158 dispersed
Car16g00633 Car-Chr16:4034763 Car07g00667 Car-Chr7:3388579 0 wgd
Car19g00585 Car-Chr19:7264932 Car07g00667 Car-Chr7:3388579 0 wgd
Car19g00422 Car-Chr19:6051801 Car07g00667 Car-Chr7:3388579 2.00E-123 wgd
Car20g00642 Car-Chr20:3616045 Car07g00667 Car-Chr7:3388579 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00667 - - csv:101221640 749.584