Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00682 ATGGATAATGGAACTTCTAATAGTCCAACACAATCTGCAGTCAATAATCCAGCTCCAACTGTCCATAGGCAAAATAGTACAGGAGACCATTTGACATCTATTTTATCTCCGTCTGGAATATCATCTTGGGCTAAGAGTTTTAGAAATCCACAACCGCCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGTTTTGGATTGCGGATGCCTTCAATGTCTCCTGTACGAGATGATACTGCCGCAGATACCAAAGCAGCAGCGCAATCTGATGTTTTCAAATCAATCACAAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTATCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACTGAAAATATAATCGGTATGGGGTTTCCTGCTGGTCACATGAGCTCCGGTTTATTTGGTTTCATTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTTCCGTTTGATGATCATAATTGTCCTCCTGTCCATCTCATAAAATCATTTTGTCTAAGTGCTTATGCATGGTTAAAGGAGGATATTGAAAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCACGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTTCTAAAGTTCTTCCATACGTCAGCAGAGGCAATTGACTATTACAATCAGAAAAGATGCGTGGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAATACTTTGAGCGCATTTTAATACATTTCAACGGAAATACTCCCCCAGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCGATTACAATTTCAAATCACAGTGCCTCTGCTTTTTATAGAGATGTGATTGGTCGTCTGTATATCTATCTGACACATGCTTGTAAACATTTGTTTTCGTTCACTGATTACTTTGATAATGCCAAGCTGGCAAGCTATGTTTCAACAATACCTTGTAGAGATTTTGTTCTCAACAAAAAAGCATCCAAAGACAAAGGATTTGATGGTAAGCCAGAAGATTTCTGGATTAGAGCACCAAAGAAAGGATTTGTAGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCTGGGGACTTTAAGATTCATTTTCATGATCGCCATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTATTAAGCGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACTCCTGGATTCCAGGTCGAGGTTGTGATGATCGACTATAATGGTACTTTGCCAACACGATCGAAAACTAATTCTGCTGGCAAAGGATCTGATTGTCGTCCTATTCATGATCGGGTTCCAGGTCATGAGGCGGCACAATCGAGCAAAGACAAAATTCCTGAGAGTGAAGAAAATGATGATGTATTCTCTGATAGTGATGAAGAAAATGGTGACACAAAAACTGGTCTAGCTCAATCAACTTCTGAAACTGCAAAAGTTGACCATTCATCAACAGCAATTTCTTCTGATAAAATTGGGAGTTTAGCGCGTGAAACAAATCATTTGTCACTTGGGAATGAGAGAAATCTACAAATCAATGCTCCAAAAGAACCAAACATTGGTGGCATGATACAACCGTCAGGCCTTGAGACCCCAAATATGGATTCGGCAAGCGCAAGTGAATTCAAAGCAATAGCCGCTGATGCATCAGTTTTCACTTTTGGGGATGAAGAAGACTTTGATAGTGAATGA 1953 39.78 MDNGTSNSPTQSAVNNPAPTVHRQNSTGDHLTSILSPSGISSWAKSFRNPQPPEAAENDSKAGNAGMSAIARFSSGFGLRMPSMSPVRDDTAADTKAAAQSDVFKSITKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIGMGFPAGHMSSGLFGFIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPVHLIKSFCLSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFHTSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERILIHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSASAFYRDVIGRLYIYLTHACKHLFSFTDYFDNAKLASYVSTIPCRDFVLNKKASKDKGFDGKPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRSKTNSAGKGSDCRPIHDRVPGHEAAQSSKDKIPESEENDDVFSDSDEENGDTKTGLAQSTSETAKVDHSSTAISSDKIGSLARETNHLSLGNERNLQINAPKEPNIGGMIQPSGLETPNMDSASASEFKAIAADASVFTFGDEEDFDSE 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3482492 3488237 - Carg05203-RA Car07g00682 151916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00682 650 MobiDBLite consensus disorder prediction 553 600 - -
Car07g00682 650 MobiDBLite consensus disorder prediction 497 623 - -
Car07g00682 650 MobiDBLite consensus disorder prediction 512 539 - -
Car07g00682 650 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
Car07g00682 650 ProSiteProfiles C2 tensin-type domain profile. 321 494 IPR014020 -
Car07g00682 650 MobiDBLite consensus disorder prediction 1 63 - -
Car07g00682 650 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 288 IPR000387 GO:0016311|GO:0016791
Car07g00682 650 MobiDBLite consensus disorder prediction 1 48 - -
Car07g00682 650 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00682 Car-Chr7:3482492 Car11g01110 Car-Chr11:8814536 0 dispersed
Car07g00682 Car-Chr7:3482492 Car09g00362 Car-Chr9:1972665 7.98E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00682 K01110 - csv:101213277 985.326