Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00688 ATGTGGGATCTGAACGATTGTCCGGATGAGAGGAAGGAGGATGAATCGGAAGGGTGTTGGTCAGCGAAGACTTGGATTGAGGGAGAGGGGGAAGAGGAGAAGGGGAAAAGAGTGGGATCCGTTTCCAATTCCAGTTCTTCCGCGGTGCTTGTGGAGGATGGATCGGATGAAGATGCGCCCACCCCCAACGCATTACTCATGCAAATTAACGCACCCAGTCCCGTCACTCGCCAGTTTTTCCCACTCCAACACCCTCAAATCTCTTCTTCTTCTTCTTCTCCTTCTCCAACAACTGCTTCTACCTTCCCTCAGGCTCACTGGGTTGGGGTCAAATTTGGGCATCCCGATCCTTTTGCCGCACCTGCTCCTCCTAATTCCATCAAGTCCACCGAGATTTCCCAGCCCATTAAGAAGAGCCGCCGCGGACCCAGGTCGCGTAGCTCTCAGTACCGCGGCGTCACTTTCTACCGGAGAACCGGCCGTTGGGAGTCACATATATGGGATTGTGGAAAGCAGGTTTATCTGGATTTGGTTTTCTCCTCCGCGTCAAATGAATCGGTTACAGGTGGATTCGATACGGCACATGCAGCTGCTCGTGCTTACGATAGAGCGGCCATTAAATTCCGCGGAGTGGAAGCGGACATAAACTTCAGCATCGAAGATTACGAGGAGGATTTAAAACAGATGGGAAATCTAACGAAGGAGGAATTTGTGCATGTACTTCGCCGACAGAGCACTGGGTTTCCCAGAGGAAGCTCCAAGTATAGAGGCGTAACGCTTCACAAGTGCGGAAGATGGGAGGCCAGAATGGGCCAATTTCTTGGCAAAAAGTATGTCTATTTGGGTTTGTTTGATACGGAAATTGAAGCTGCAAGGGCTTATGATAAAGCTGCAATCAAGTGTAATGGCAAGGAAGCTGTGACTAATTTCGATCCCAGCATCTATCAGAATGAACTGAATCCTATAAGTGATTCAACCGCCAATTTGGGAGATCGCAGTCTCGATTTGAGTTTGGGAAATTCAAGCTCAAACCAAAACGACACCCCAAAGCCTTCCGTAGATCCCCACCATTCTTCTTCTTCTTCAGCTCCTCTATCCATGGAAGACGAGTGGCAACGCACTCAAGGATTTAGGCGTCCTCAGCTAAATTTGGTAGAAGAATCAAGTGGAGCAGGTGGAAATAAACATTTGAAGGCAGCAGAGGGAAGAAATAATAGGTACCTGGAGAGTGAAACGATGCAGCGTCTAAGCCAAACGCACATTCAATCTCCGGCTTCATTTGAAATGCAAAGACACGCCCAATTCAGCCGGCAGGTGGCGGGTGGAGATCACAATCACAATCACAATCACAATCCAACCCTCAATTATCAAGTGGGTGCTACTGCTTTAACTATTCAGTTTGGGGGCAGCAGTAATGGTGGAGGAGGGCGAATAGGAAGCGATCTATCACTGTCTCTAAATGATCATAATCAAGTTGTTGATTATTCGGGGCCATCTCAAGCTCTTGCAACTGCTGCAGCATCATCAGGATTCGCACCCCCTTCCAAAAATTGGCTGCACAACAATGGGTTTCACTGTCTTATGAGGCCCTCCTGA 1596 48.68 MWDLNDCPDERKEDESEGCWSAKTWIEGEGEEEKGKRVGSVSNSSSSAVLVEDGSDEDAPTPNALLMQINAPSPVTRQFFPLQHPQISSSSSSPSPTTASTFPQAHWVGVKFGHPDPFAAPAPPNSIKSTEISQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLDLVFSSASNESVTGGFDTAHAAARAYDRAAIKFRGVEADINFSIEDYEEDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYQNELNPISDSTANLGDRSLDLSLGNSSSNQNDTPKPSVDPHHSSSSSAPLSMEDEWQRTQGFRRPQLNLVEESSGAGGNKHLKAAEGRNNRYLESETMQRLSQTHIQSPASFEMQRHAQFSRQVAGGDHNHNHNHNPTLNYQVGATALTIQFGGSSNGGGGRIGSDLSLSLNDHNQVVDYSGPSQALATAAASSGFAPPSKNWLHNNGFHCLMRPS 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3534692 3537260 + Carg05209-RA Car07g00688 151922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00688 531 Pfam AP2 domain 253 302 IPR001471 GO:0003700|GO:0006355
Car07g00688 531 Pfam AP2 domain 149 210 IPR001471 GO:0003700|GO:0006355
Car07g00688 531 ProSiteProfiles AP2/ERF domain profile. 149 218 IPR001471 GO:0003700|GO:0006355
Car07g00688 531 MobiDBLite consensus disorder prediction 113 149 - -
Car07g00688 531 MobiDBLite consensus disorder prediction 1 62 - -
Car07g00688 531 MobiDBLite consensus disorder prediction 322 371 - -
Car07g00688 531 MobiDBLite consensus disorder prediction 1 38 - -
Car07g00688 531 ProSiteProfiles AP2/ERF domain profile. 254 311 IPR001471 GO:0003700|GO:0006355
Car07g00688 531 MobiDBLite consensus disorder prediction 322 369 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00873 Car07g00688 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00688 Car-Chr7:3534692 Car14g00972 Car-Chr14:6919663 5.77E-136 dispersed
Car03g00873 Car-Chr3:6972936 Car07g00688 Car-Chr7:3534692 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3867 PF00847 AP2 9.00E-05 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00688 K09284 - csv:101214724 602.053