Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00707 ATGCGTTGGTTGCCTAACATCTCCTTTACCCCTTCTTCCATAGTCAGGATTCCGGGCACCGCCACCGCCACCGGTGGCGATTCTCCCACCAGAAGGACTGCCTCCACTCGCTCCGACGACAATAATTATTGGAGAATTGCTTGGCGTTTTGGCGCCTCTAAGTATTCGCGCCAAAGGAAGCTTCGAAACCTAAGCGGAAATGATCGCGCCGCTGCTTCTTTGCCTAAATGGTCCGATACTACGCCCGAGCCGGTCTCCTTCTCTAAATCGCCTAGTACCTCTGAGGATCGTGCCGTGCCGTTGCCGCTCCCGGAGCTTTCCCCTACGTTCCAGCGTCGAGAAGGGATTTCGAATTCGAATTCTGGATGTGGAGATGCGGATTGCCCTCTTCCGTCGCCCAAGGTGTTGCGTGGTCGAGGCGGGGACGACCGCGATATAGATAGAGATAGAACTGCCTCTTCTCACAAGATTGGGGGTGGGGCCTCCAATAGCGCTCCGATTAGAAGTATATTTGATTCCCGGGAGAGGCAGAGGAAAGAAGAGCAGGTTGAGACAAGGTCGTCTAGCAGGGCGAATCGAGATGCATTAGGACATACGCAAAGATCGCGGAACAGTTTCAGGATTGATGTTCCCAGTAGAAGTGCTCCTACTAGTCCTTATGCAAGTCCTGCACTCAGTCCCCAAAGAAATAGTTCCATTAACCTTTCAAATATCCATCATGAGGCGGCTCCAGTCGGAAATCAAGGCTGGTCTGCACCTGAGCTGCCAAATTTCCATTATGGGACTCCAGTAGGAAATCACGTCTGGTCTGCTCCAGAGCTGCCAGCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTTGATGGCTCCACTTTTAGCTCTGAGAGTTCTCCCATGCATAGCCCAAGAATGCATAGCCCAACAACACACAGCCCAAGAATGCATAGCCCAAGAATGCATAGTCCAAGAGGTAGAAGTCCCCACCGAGATCCAAGAAGTCCTACAGGACCTGCATCTCCATTGCACACCAAGATTTCCCTTGAAACACGTTCTGTGCGTCGAGAAAGTGCTGGTCCTGTGAGTGTCCACCCTTTACCTCTTCCTCCTGGAGTACCAATGCCTTCACCATCAACCCCAATGCCTTTACAATCAACCCCAATTACACAAGCCAACACTAAAACTGAGGCAATCTCAATGAAAAATCAATGGCAGAAAGGAAAGCTTATTGGCCGGGGCACATTTGGTAGTGTTTACGTTGCAAGCAACAGAGAAAATGGATCTTTATGTGCAATGAAGGAAGTTGAATTATTTCCTGATGATCCGAAATCGGCTGAATGTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGCAGCGATGTTGTTGAAGATCGATTATATATATACCTAGAGTATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAATTTTACTCGTCACATCCTCTCAGGGTTGGCCTACTTACACAGCACAAAGACTATACATCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACATCTTACAGGACAAGTTGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTTCTTCTGTCTGTGATGCAGAAAGATAACAACTCTGATCTTGCCCTGGCTGTTGATATTTGGAGCCTTGGGTGCACTATTATAGAAATGTTCACTGGCAAGCCACCTTGGAGCGAGTATGAAGGGGCTGCAGCAATGTTTAAGGTCATGAGAGATGCCCCACCAATACCTGAATCATTATCATACGAAGCCAGAGAGTTCTTAAAATGCTGCTTTCAGAGAAATCCGGCAGAGAGGCCGACTGCTGCCATGCTGCTTGAACATCCGTTTATGAAAAACTTGCAGAATCCCGAAGCTCCATCTTTCTCGCTGCCCGTAGCTGGATCAAATTTGACGGATAAATGCTATAGCCCAAGTGAACAGTTTTCAAGTAAATTTGATCAGCTTTCCATGCTTCCAAGCTCACAAAATCCCAAGGGAAAATTAGCTTCCGAGAGGCAAGAGTTGCTTTTCCCCATGCTCTCCAGTCCATGA 2196 47.77 MRWLPNISFTPSSIVRIPGTATATGGDSPTRRTASTRSDDNNYWRIAWRFGASKYSRQRKLRNLSGNDRAAASLPKWSDTTPEPVSFSKSPSTSEDRAVPLPLPELSPTFQRREGISNSNSGCGDADCPLPSPKVLRGRGGDDRDIDRDRTASSHKIGGGASNSAPIRSIFDSRERQRKEEQVETRSSSRANRDALGHTQRSRNSFRIDVPSRSAPTSPYASPALSPQRNSSINLSNIHHEAAPVGNQGWSAPELPNFHYGTPVGNHVWSAPELPASAMMRGVPPAFFDGSTFSSESSPMHSPRMHSPTTHSPRMHSPRMHSPRGRSPHRDPRSPTGPASPLHTKISLETRSVRRESAGPVSVHPLPLPPGVPMPSPSTPMPLQSTPITQANTKTEAISMKNQWQKGKLIGRGTFGSVYVASNRENGSLCAMKEVELFPDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDVVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVMQKDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDAPPIPESLSYEAREFLKCCFQRNPAERPTAAMLLEHPFMKNLQNPEAPSFSLPVAGSNLTDKCYSPSEQFSSKFDQLSMLPSSQNPKGKLASERQELLFPMLSSP 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3640237 3644449 - Carg05228-RA Car07g00707 151941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00707 731 MobiDBLite consensus disorder prediction 137 154 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 701 731 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 189 231 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 291 316 - -
Car07g00707 731 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Car07g00707 731 Pfam Protein kinase domain 405 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00707 731 MobiDBLite consensus disorder prediction 79 95 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 291 347 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 111 125 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 17 37 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 171 188 - -
Car07g00707 731 ProSiteProfiles Protein kinase domain profile. 404 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00707 731 MobiDBLite consensus disorder prediction 66 231 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 701 716 - -
Car07g00707 731 MobiDBLite consensus disorder prediction 156 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00707 Car-Chr7:3640237 Car18g01166 Car-Chr18:11408514 1.77E-112 dispersed
Car12g00485 Car-Chr12:3045166 Car07g00707 Car-Chr7:3640237 4.55E-162 wgd
Car03g00893 Car-Chr3:7090550 Car07g00707 Car-Chr7:3640237 0 wgd
Car05g00172 Car-Chr5:890545 Car07g00707 Car-Chr7:3640237 1.56E-173 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88991 PF00069 Pkinase 3.60E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00707 - - cmo:103484760 1048.88