Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00722 ATGGCTATCCTCACCCTTATCTGTTATTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGTGCGAAGCGGCTGCTAAGTGAGGCTGCTGGAAACTCCAGTGTAACTTTATATCCCTACAAGGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTTGGTACAGTCTATGCAGGGAGGCTTCATGAGGATGAGTGGGTTGCTGTGAAGAAGATCAAATATAGAGACCACAATAGCATTGATCAGGTCATGAATGAGATAAAACTACTCTCCTCGGTGAGCCACCCAAATCTAGTCCGCTTGCTTGGCTGCTGCATTGAAGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCCCAACATCTCCAGAGAGAGCGTGGAAATGGCCTTCGATGGACGACAAGGCTCACCATTGCAGCTGAAACTTCCAATGCAATAGCATACCTACATTCTGCTGTGCATCCACCAATATATCACAGAGATATCAAGTCAAGCAATATACTTTTGGATCATGGATTCAAATCAAAAGTTGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACACATCTCAACCGCTCCACAAGGGACTCCGGGCTATGTTGATCCACAATACCATCAAAATTTCTATCTTTCAGATAAAAGTGACGTTTATAGTTTTGGAGTAGTCCTGGTAGAGATTATAACAGCATTGAAAGTGGTTGATTTCACTCGTCCCCAGAGTGAAGTAAACCTAGCAGCACTTGCCATTGATAGGATTGGGAGAGGTGCTGTGGATGAACTAATTGATCCTTTCCTCGAGCCACATAGAGATGCTTGGACCCTCTACTCTATTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTTCATAGCGACATGAGGCCTTCGATGACAGAAGTAGCAGAGGAACTGGAATCCATCAGACGCAACGGGTGGACATCCATGGAGGAGAATCTTTGTGCAGCATCATCAGCAGGGTCGGCTTGTTCATCTCCTCGTAGTATAAGCGATAGATCTATAAGTAGCATTACAATTAAGAAGGCCGGGCTGCTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCACCAGAGAACAATCATCAAAAGGACCATCTGCCTCCTGTAGAGGAGGTTACGGATAGTTCCCCAGTTTCCATACAAGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTAGTACGGTGA 1287 45.14 MAILTLICYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPYKEIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLRWTTRLTIAAETSNAIAYLHSAVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRGAVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMTEVAEELESIRRNGWTSMEENLCAASSAGSACSSPRSISDRSISSITIKKAGLLAGLGSQRLIIPPENNHQKDHLPPVEEVTDSSPVSIQDPWLSEQSSPSTNSLLGNVVR 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3720077 3722190 + Carg05243-RA Car07g00722 151956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00722 428 MobiDBLite consensus disorder prediction 382 428 - -
Car07g00722 428 ProSiteProfiles Protein kinase domain profile. 52 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00722 428 Pfam Protein tyrosine and serine/threonine kinase 55 324 IPR001245 GO:0004672|GO:0006468
Car07g00722 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Car07g00722 428 MobiDBLite consensus disorder prediction 400 428 - -
Car07g00722 428 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00722 Car-Chr7:3720077 Car15g00057 Car-Chr15:398012 1.32E-91 dispersed
Car12g00472 Car-Chr12:2964459 Car07g00722 Car-Chr7:3720077 6.69E-164 wgd
Car03g00914 Car-Chr3:7211307 Car07g00722 Car-Chr7:3720077 0 wgd
Car05g00176 Car-Chr5:937808 Car07g00722 Car-Chr7:3720077 4.56E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88992 PF07714 PK_Tyr_Ser-Thr 3.60E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00722 - - csv:101222324 798.119