Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00733 ATGTCCCACGATTATCATCCTCATCAAGGAATCTTAGCCTTCTCTAATCCCTTAGACAAATCCAATTCCCCTTCTCTCCCTCACCAGATCCGCCGTGATAAGCTTCGAGTCGACTCCTTCTCCGCCGATCCACTCCCTCCGCCACCGCCTACGGTGGCTGGAATCGACGAACATCTCCACCATCACCATCACCATCACCAACAGCATCTTCACCATGTCTATGCTACCTCACCTACGGAGGGGACCATGTTATCAGACATGTTCAATTACCCTCCAACTCCCTCCGCTGCTCCCGCCTCCGTTGAATTCTCCGACAATTTTCGAACTTTACGCCAACCCAACTCGGCTTCCGCCATGCAGCTTTTCTTGATGAACCCTCCTCCGCCGCCACCACCACCACCACGATCGCCCTCGCCACCTTCTACCTCCTCCACTCTCCACATGCTCCTCCCGAATCTACCGTCGGGTTCTCTTCAGGGTTTCGAAAGTGGTGGCGTTGGAGATCAGACGGGGTTTGGCCAATTTGCTGTCGCTGAAAATCAAGGGCTTTCGCTCTCGCTTCACTCGTCGTCGTTACAACACTTGGAGGACGTCGGAGCCGGTGCGAAAGCGGATGAATTGCGAATTAGAGATGGTGGGATGTTGTATAATTACAACAACAACAATAATCAAGTCCATGGCGGAGGAGGAAATGGATCAAACTCCTCAATTTTGCAATATTCTTTTAGGAATAATTCAGAGAATTCTCCTCATAGCTTTCAAATGAATCCAAACCATCAAGTTCAAATTGGATTTGGGTCTTCTTTGGGAGTTGTAAATCTTTTGAGGAATTCAAAATATGTCAAAGCCGCTCAAGAATTGCTCGAGGAATTTTGCAGCGTTGGTCGGGTTCAGCTCAAGAAAAACAAGTCCAATATGAAGCAAAACCACAACAATCCCGACACCGCCGCAGGCGGCGGTGGCGGTGGCGCGTCTTCGTCCTCCACAAAGGATCATCCTCCCTTATCGGCTACTGATAGAATTGAGCATCAGCGGAGGAAGGTCGAACGCAGGTACAACTTATACCGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATGGGGTTCGGAGCAGCAGCGCCATACACAACGCTAACGCAGAAGGCGATGTCAAGACACTTCCGGTGCTTAAAAGACGCCATAACCGAGCAGTTAAAGCAGAGCTACGAAGCATTGGGGGAGAAAGGTGGAAATGGAGGCTCGGGAATAACTAAAGGAGAGACACCAAGATTGAAGCTTCTGGAACAAAGCCTCCGCCAGCAAAGGGCTTTCCATCAAATGGGTATGATGGAACAAGAAGCTTGGAGGCCACAGCGTGGCCTCCCTGAACGATCTGTCAACATCCTTAGAGCTTGGCTGTTCGAGCATTTTCTTCACCCGTACCCCAGCGACGCAGACAAGCTCCTGTTAGCTCGGCAGACTGGTTTGTCCAGAAATCAGGTTTCAAATTGGTTCATTAATGCAAGAGTTCGTTTGTGGAAACCCATGGTAGAAGAAATGTACCAAATTGAAGGCAAGGACGAAACAGATCACTCTCATCAACAACAGCCATCAAAAGACGACGACGACACCACAGACAATAAGATCCAAAACAGTGCCATAAATGCACAAAATCCAACTCCCACCACCGCCACCACTTCCTCCATTCCACCGCCGTCTACCACCATTGCAGAGGAAGGTGCGGCGGGGTTCACGGCGACCCATGATCAATTCTCGGAGCTGCATGATGTGTGGCGACATGGAAGCGGACAACATTATGGGACCATGTCTGAGGATGCCAGAGCAGCGACTGACGTAAGTAATGGTCCAACACTTATAAGGTTTGGAACCAGTGGTACGACAACCGGTGACGTGTCACTCACTTTAGGTCTCCGCCACGCCGGTAACACTTCCGCCGCCACTATGGATAACCCTTCTTTCTCGCTCAGAGACTTTGGTCACTCTTAG 1995 50.18 MSHDYHPHQGILAFSNPLDKSNSPSLPHQIRRDKLRVDSFSADPLPPPPPTVAGIDEHLHHHHHHHQQHLHHVYATSPTEGTMLSDMFNYPPTPSAAPASVEFSDNFRTLRQPNSASAMQLFLMNPPPPPPPPPRSPSPPSTSSTLHMLLPNLPSGSLQGFESGGVGDQTGFGQFAVAENQGLSLSLHSSSLQHLEDVGAGAKADELRIRDGGMLYNYNNNNNQVHGGGGNGSNSSILQYSFRNNSENSPHSFQMNPNHQVQIGFGSSLGVVNLLRNSKYVKAAQELLEEFCSVGRVQLKKNKSNMKQNHNNPDTAAGGGGGGASSSSTKDHPPLSATDRIEHQRRKVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAITEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQIEGKDETDHSHQQQPSKDDDDTTDNKIQNSAINAQNPTPTTATTSSIPPPSTTIAEEGAAGFTATHDQFSELHDVWRHGSGQHYGTMSEDARAATDVSNGPTLIRFGTSGTTTGDVSLTLGLRHAGNTSAATMDNPSFSLRDFGHS 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3779080 3782668 - Carg05254-RA Car07g00733 151967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00733 664 MobiDBLite consensus disorder prediction 522 543 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 39 70 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 522 573 - -
Car07g00733 664 Coils Coil 338 358 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 120 147 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 544 570 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 1 27 - -
Car07g00733 664 ProSiteProfiles 'Homeobox' domain profile. 448 511 IPR001356 GO:0003677
Car07g00733 664 MobiDBLite consensus disorder prediction 123 140 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 302 344 - -
Car07g00733 664 MobiDBLite consensus disorder prediction 302 334 - -
Car07g00733 664 Pfam Homeobox KN domain 468 507 IPR008422 GO:0003677|GO:0006355
Car07g00733 664 Pfam Associated with HOX 275 398 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00733 Car-Chr7:3779080 Car20g00987 Car-Chr20:11517710 2.50E-171 dispersed
Car02g00391 Car-Chr2:2948817 Car07g00733 Car-Chr7:3779080 6.43E-155 wgd
Car03g00922 Car-Chr3:7251035 Car07g00733 Car-Chr7:3779080 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3876 PF07526 POX 9.00E-39 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00733 - - csv:101202767 862.062