Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00755 ATGATACCCTTTTCCCCATCTTCTTCAATATCCTTTCTGTTCTTCTTTTTCTTCCTTTTTCCCCTCTCTGTTTTCTCTGTTTCTTCTTCTCATACAGACGCCCAGCAGCTGATTTCATTGAAATCTTCACTTCCCAATCCAAACCTCCTTCAAAACTGGCTTTCCAACGGCGACCCATGTTCGTTTTCCGGCGTTTCCTGCAAGGAAACCAGAGTTTCCGCCATAGATTTGAGCTTCGTGTCGTTGAGCTCTAATTTCAGCCATGTTTTCCCTTTGCTTGCAGCTCTCGACCATTTGGAATCGCTTTCTCTGAAATCCACGAACCTTACTGGCTCCATTTCCCTGCCTGCTGGATTCAAATGTAGCCCTCTTCTTTCTTCTCTGGATCTGTCACTCAATGGCTTGTTCGGCTCTGTTTCTGATGCCTCTTATTTGGGGTTTTGTTCCAATATCAAGTCGCTTAATCTGTCATTTAACGCTTTTGATTTTCCCCCAAAAGACTCTGCCGCCGGATTGAAGCTCGATTTGCAAGTTCTTGATCTTTCTTCCAATCGGATTGTTGGGTCGAAATTAGTTCCATGGGTTCTCTCTGCTGGGTGTAGTAATTTGCAGTTCTTAGCATTGAACGGTAACAAAATCAGCGGCGAAATTAATCTCTCATCCTGTAATAAACTCCAGCATATGGATATCTCCGGCAACAATTTCTCTGCGGGTATTCCGTCGTTAGGCGATTGCTCTGTTTTGGAGTATCTTGATATCTCCGGCAATAAGTTCACCGGCGACGTCGGAAATACTCTGTCTTCTTGTTTGCAACTGAGATTTCTGAATCTCTCGAGCAACCAGTTTCAAGGATCAATCCCTTCATTTTCATCGCCGAATTTGTGGTTTATTTCGCTTGCTAACAACGATTTTCAGGGGGAGATTCCGGTGAGTATTGCTGATTCTTGTTCTAGTTTGGTTCATTTGGATCTTTCTGAAAATGGTTTGATTGGGGGTATACCTTCTGGTTTGGGGTCTTGTTCTTTGTTGGAATCTTTGGACATTTCTAAAAATAACCTCTCTGGTGAGCTCCCCATTGATGTTTTTGCCAAAATGAGTAGTTTGAAGAGACTGTCTATGTCGGATAACAAGTTTTTCGGGGTTTTGTCGGATTCTCTGTCTCAGCTCACCACTTTGAATTCCTTGGATCTGAGTTCTAATAACTTCTCTGGCTCGATTCCTGTCGGGCTCTGTAAAGATCCTAAGAACAGCTTGAAAGAATTGTTTCTTCAGAACAATTGGTTGACTGGTCGGATCCCTGCAAGTATTAGCAACTGTTCTCAGCTGGTTTCGCTTGATTTGAGCTTCAACTTTCTGAGTGGGACGATCCCTTCAAGCTTGGGATCACTATCTAAGCTGAAGAACTTGATCATGTGGTTGAATCAGCTGGAAGGGGAGATCCCATCGGATTTTAAGAACTTTCAGGGGCTTGAGAATCTGATCCTGGATTTCAATGAGCTAACCGGGACGATTCCTTCCGGGTTAAGCAATTGCACGAACTTGAACTGGATTTCGTTGTCGAACAACCGGTTGAGCGGAGAGATACCGAGGTGGATTGGGCAGCTGCCAAGCCTAGCCATCCTTAAGCTGAGTAACAACTCATTCCATGGAAAGGATACCTCGAGAGCTGGGTGA 1674 44.15 MIPFSPSSSISFLFFFFFLFPLSVFSVSSSHTDAQQLISLKSSLPNPNLLQNWLSNGDPCSFSGVSCKETRVSAIDLSFVSLSSNFSHVFPLLAALDHLESLSLKSTNLTGSISLPAGFKCSPLLSSLDLSLNGLFGSVSDASYLGFCSNIKSLNLSFNAFDFPPKDSAAGLKLDLQVLDLSSNRIVGSKLVPWVLSAGCSNLQFLALNGNKISGEINLSSCNKLQHMDISGNNFSAGIPSLGDCSVLEYLDISGNKFTGDVGNTLSSCLQLRFLNLSSNQFQGSIPSFSSPNLWFISLANNDFQGEIPVSIADSCSSLVHLDLSENGLIGGIPSGLGSCSLLESLDISKNNLSGELPIDVFAKMSSLKRLSMSDNKFFGVLSDSLSQLTTLNSLDLSSNNFSGSIPVGLCKDPKNSLKELFLQNNWLTGRIPASISNCSQLVSLDLSFNFLSGTIPSSLGSLSKLKNLIMWLNQLEGEIPSDFKNFQGLENLILDFNELTGTIPSGLSNCTNLNWISLSNNRLSGEIPRWIGQLPSLAILKLSNNSFHGKDTSRAG 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3917881 3919554 - Carg05277-RA Car07g00755 151989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00755 557 Pfam Leucine Rich Repeat 442 463 IPR001611 GO:0005515
Car07g00755 557 Pfam Leucine Rich Repeat 417 439 IPR001611 GO:0005515
Car07g00755 557 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Car07g00755 557 Pfam Leucine Rich repeat 315 332 IPR001611 GO:0005515
Car07g00755 557 Pfam Leucine rich repeat 343 402 IPR001611 GO:0005515
Car07g00755 557 Pfam Leucine rich repeat 489 547 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00755 Car-Chr7:3917881 Car04g02087 Car-Chr4:17006651 1.70E-29 dispersed
Car07g00755 Car-Chr7:3917881 Car03g00947 Car-Chr3:7362638 3.27E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00755 K13415 - csv:101209118 855.129