Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00766 ATGAACACCGCTGGTCGACTCATTGCTGGGTCTCACAATAGAAACGAGTTCGTTCTGATCAATGCAGAGGACTCTGTTCGGACAAAGTCTGTGGAGGAATTGAGTGGACAAACATGTCGGATTTGTGGAGATGAGATAGAGTTAACTGATGAAGGAGAGCTCTTTGTTGCTTGTAATGAATGTGCTTTCCCAGTTTGTAGAACTTGCTATGAGTATGAGCGAAGAGAAGGAAATCAAGCTTGTCCACAGTGTAGAACCAGATACAACCGCATTAAGGGTAGTCCTCGGGTTGAAGGCGATGACGATGAAGATGATACCGATGATTTGGATAACGAGTTCGACTATGGCAATCTCAATTCGTTTCGCCTTCATGCTGTCGATGCATCGTTTGTTTCACGCCTTAACACTAGCTGTGGTTCCCACCGTAATGCATCTCGCATCAATGGACAGTCGGAGCATGAACCGTCTCCCCTTCGTTTGGAAATTCCTCTCCTGACATACGGCGAGGAGGATTACGAGATTTCTTCTGATCAACATGCTCTTGCACCCCATTTTATGGATCGTGGAAACAGAGTCCATCCAATGTCGTACCCCGATCCATCGATATCTTCTAAACGTAGACCAATGGTTCCCGAGAAAGATATTGCTGTATATGGTTATGGGAGTGTGGCATGGAAGGACAGAATGGAGGATTGGACGAAGAAGCGATATGATAAACTTCAAGTGGTGAAGCATCAAGGGGTTCAAGACGGTGGAAATGATATCGACGATCCCGATTTGCCCATGATGGATGAAGCTAGGCAACCGCTATCAAGGAAATTGCCCATCTCTTCGAGCATGATAAACCCGTACAGATTAATCATCTTGCTTCGACTTGTTATTCTCGGCCTGTTTTTCCATTACAGAATTCTTCATCCAGTTAAAGATGCTTATGGCCTGTGGTTGACTTCAGTAATATGTGAAATTTGGTTTGCGGCATCGTGGATTCTCGATCAGTTCCCGAAATGGTATCCGATTGAAAGGGAAACGTATCTCGATAGGCTATCGCTGAGGTATGAAATAGAAGGGAAACCTTCTGAATTAGCCAGCGTGGACGTATTTGTCAGTACCGTTGATCCAACGAAAGAACCTCCACTTATCACTGCTAACACGGTACTTTCCATCCTTGCAGTCGACTATCCTGTCGATAAAGTTGCATGCTATGTCTCAGATGACGGTGCAGCCATGTTAACATTTGAAGCTCTCTCTGAGACATCTGAATTTGCAAGGAAATGGGTTCCTTTCTCTAAGAAATTCAATGTCGAGCCCCGTGCCCCCGAGTTTTACTTTTCTCAGAAGATCGATTATTTGAAGAACAAGGTCCATCCGGAATTTTTCAGGGAAAGACGAGCAATGAAGAGAGAATACGAAGAATTTAAGGTTCGGATAAATGCGCTGGTCTCCATGGCTCAAAAGGTCCCTGAGGATGGCTGGACAATGCAAGATGGTACTCCATGGCCCGGGAACAACGTTCGAGACCACCCTGGCATGATTCAGGTCTTCCTTGGCCAGAATGGTGTTTGTGACATTGAAGGAAACGAGCTGCCACGTTTGGTTTACGTTTCTCGTGAAAAGCGACCCGGGTTTGAACATCACAAGAAGGCCGGGGCCATGAATGCACTGGTTCGAGTCTCAGCGGTTCTGTCAAATGCTCCTTATCTACTCAATGTCGACTGCGATCACTACATTAACAATAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGATCCTACGTCCGGGAAGAAAGTTTGTTATGTGCAGTTTCCTCAAAGATTTGATGGGATCGATCGACATGATCGATACTCAAATCGGAATGTTGTGTTCTTTGATATCAACATGAAAGGATTAGACGGAGTACAAGGACCGATATATGTCGGTACGGGATGTGTTTTCCGAAGGGTTGCCCTCTACGGTAATGACGCTCCTGCCAAGAAGAAACGCCCGAGCAAAACATGCAACTGCTTGCCAAAATGGTGCTGTCTGTGTTGTGGGTCTAGAAGGAACAAGAACGAGAAGAAGAAGAAGACAACACAGATCCATGCGCTCGAGAATATCGAGGGAATCGAAGGTAAAGAATCATTTGCCATTCATATCATATCATATCATATCATATCCAACGCGAGTTCCCACATGTTTGTTGCAGAACTAAGCATAGAGAAATTGAACGTGTCCGAAACTAAATTAGCGAAGAAATTCGGGCAATCTCCAGTGTTTGTCGCGTCGACCGTGTCGGAAAGTGGAGGAAGTCGTCATGATGTGAGTGCTGCCTCACTGCTAAGAGAAGGCATTCAAGTTATCAGTTGTGGTTATGAAGATAAAACAGAATGGGGGAAAGAGGTTGGGTGGATATATGGTTCTGTTACTGAAGATATCTTGACTGGATTTAAGATGCACTGTCACGGTTGGCGGTCTGTGTACTGTATTCCCGAGAGGCCTGCTTTTAAAGGGTCGGCTCCGATTAACCTCTCCGATCGTCTAAACCAAGTTTTGCGGTGGGCTCTAGGATCTGTTGAGATATTCTTGAGCAGACATTGTCCGATCTGGTATGGCTATGGAGGCGGGTTGAAATGGTTGGAACGATTTTCGTACATAAACTCGGTGGTCTATCCGTGGACCTCGATTCCATTGCTTGTTTACTGTAGCCTGCCTGCTATCTGTCTTCTCACCGGAAAGTTTATTGTCCCTGAGATAAGCAACTATGCCAGTCTTATTTTCATGGCACTCTTCATTTCAATTGCTGCGACCGGTATCCTCGAGATGCAATGGGGTGGTATTGGCATCGACGACTGGTGGAGAAACGAGCAGTTTTGGGTTATCGGAGGCATTTCGTCGCATCTTTTTGCTCTTTTCCAAGGTCTACTCAAGGTTTTAGCTGGTGTCAGCACCAACTTCACAGTTACATCCAAAGCAGCCGATGATGGCAAATTTTCAGAGCTCTATATCTTCAAATGGACATCATTATTAATACCTCCCACGACCTTGTTGATCATAAACATCGTCGGCGTGATCGTCGGGATCTCAGACACCATCAACAATGGATACGACTCGTGGGGTCCTCTTTTCGGAAGGCTATTTTTCGCTCTTTGGGTGATCATCCACCTCTACCCATTCTTGAAGGGATTGGTAGGGAAACAAGATCGTCTACCAACAATCATTGTTGTTTGGTCCATTCTTTTAGCCTCAATCTTAACATTACTTTGGGTAAGGATCAACCCATTTGTATCAAAAGACGGCCCCGTTCTAGAAGTTTGCGGGTTGAACTGTGATTAG 3315 45.28 MNTAGRLIAGSHNRNEFVLINAEDSVRTKSVEELSGQTCRICGDEIELTDEGELFVACNECAFPVCRTCYEYERREGNQACPQCRTRYNRIKGSPRVEGDDDEDDTDDLDNEFDYGNLNSFRLHAVDASFVSRLNTSCGSHRNASRINGQSEHEPSPLRLEIPLLTYGEEDYEISSDQHALAPHFMDRGNRVHPMSYPDPSISSKRRPMVPEKDIAVYGYGSVAWKDRMEDWTKKRYDKLQVVKHQGVQDGGNDIDDPDLPMMDEARQPLSRKLPISSSMINPYRLIILLRLVILGLFFHYRILHPVKDAYGLWLTSVICEIWFAASWILDQFPKWYPIERETYLDRLSLRYEIEGKPSELASVDVFVSTVDPTKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFSKKFNVEPRAPEFYFSQKIDYLKNKVHPEFFRERRAMKREYEEFKVRINALVSMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVCDIEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGVQGPIYVGTGCVFRRVALYGNDAPAKKKRPSKTCNCLPKWCCLCCGSRRNKNEKKKKTTQIHALENIEGIEGKESFAIHIISYHIISNASSHMFVAELSIEKLNVSETKLAKKFGQSPVFVASTVSESGGSRHDVSAASLLREGIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPERPAFKGSAPINLSDRLNQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFMALFISIAATGILEMQWGGIGIDDWWRNEQFWVIGGISSHLFALFQGLLKVLAGVSTNFTVTSKAADDGKFSELYIFKWTSLLIPPTTLLIINIVGVIVGISDTINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLVGKQDRLPTIIVVWSILLASILTLLWVRINPFVSKDGPVLEVCGLNCD 1104
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3986767 3991788 - Carg05288-RA Car07g00766 152000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00766 1104 Pfam Cellulose synthase 364 1092 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car07g00766 1104 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Car07g00766 1104 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00961 Car07g00766 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00766 Car-Chr7:3986767 Car09g01056 Car-Chr9:9352842 0 dispersed
Car03g00961 Car-Chr3:7453357 Car07g00766 Car-Chr7:3986767 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00766 K10999 - csv:101211094 1966.81