Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00775 ATGGTGAGAGATGACTTGTGTATTACAATTCCGAGCGATTTCAGATGTCCGATCTCGCTTGACGTCATGAAATCCCCTGTAAGTTTGTGTACCGGAGTTACTTACGATCGTTCCAGTATCCAGAAATGGCTCGACAATGGAAACAATACTTGTCCGGCTACCATGCAGATCCTTCAAACGAAGGAGTTCGTCCCTAACCACAATCTCCACCGCCTTATTCAGATTTGGTCCGATTCCCTTCGGCAAAGAGTCCACTCGCCCGATTCCTCCCCTGTTTCTGACTCTGTTCTTTCCTCCGATCAAGTTCTTGACCTCGTCAAGCGCATAGAGATCGATCAGTCTCGCACCGACTCGCTTCTGCGGCTTGTCTCTTTCGCCGCTAAATCGGTGGAGAATCGGAGGCTTCTCTGTGGAATCGGCGGTTTCGTGCCGGTTCTTGTCGATCTTCTTAGCAATGTCAATGGCGGCGTTTTGGTTGAGCAGACTGTGAGGTTATTGCATTTGATTCGAAATGAAATAGAAGATAAGGAGCGATTTGTGAAATCGATGTTGAAGAGCGATCGTAATTGTCTTTCGTCTCTGCTTCTGATTCTGCGGAAAGGAACCGTCCAATTGAAAATCTGTTCTGCTAGTCTACTAGAGCATCTCGCAATCGACGCCGAATCGAAGATTGTAATCGCTGAAACGGATGGATTGATGCAAGAATTACTGAAATTAACAAACTCTGAGAACGATTCAAACCTAATCGAATCGGTTCTATCGTGTTTAATTTCAATTTCAATGCCGAAACGGATCAAAATCAAATTAGTCCATCTCGGAGCGATAAAATCGGTAACGAAGCTTCTCTCAGAAGCGAACTCAAGTTCGAGCGTTTCAATAACGGAGAAGGTTCTGAAAGTGCTGGAAACAGCGTCGACGGTGAGGGAAGGAAGGATGGAGATCGGAGAGGACTCAACGTGCTTAGCAGCGATCGTACAAAAGGTACTGAAGGTGTCGAACACTGCGACGGAGCACGCGGTGACGACGCTGTGGAGCGTGTGCTATCTGTTCAGAGATGAGAAGGCAGCAGAGGCGTTAACGAAGGCGAACGGATTGACAAAGATTTTACTGTTAATGCAGAGCAATTGCTCGCCACCAGTACGACAGATGGCGAGAGATTTGCTGAAGATTTTCCGAATCAATTCGAAATCGTGCCTAGCGAGTTACGACACGAAAACCACGCACATCATGCCCTGTTAG 1239 46.97 MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLHRLIQIWSDSLRQRVHSPDSSPVSDSVLSSDQVLDLVKRIEIDQSRTDSLLRLVSFAAKSVENRRLLCGIGGFVPVLVDLLSNVNGGVLVEQTVRLLHLIRNEIEDKERFVKSMLKSDRNCLSSLLLILRKGTVQLKICSASLLEHLAIDAESKIVIAETDGLMQELLKLTNSENDSNLIESVLSCLISISMPKRIKIKLVHLGAIKSVTKLLSEANSSSSVSITEKVLKVLETASTVREGRMEIGEDSTCLAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANGLTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLASYDTKTTHIMPC 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4053735 4054973 + Carg05297-RA Car07g00775 152009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00775 412 Pfam U-box domain 10 78 IPR003613 GO:0004842|GO:0016567
Car07g00775 412 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00973 Car07g00775 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00441 Car-Chr2:3486625 Car07g00775 Car-Chr7:4053735 6.55E-133 dispersed
Car07g00775 Car-Chr7:4053735 Car20g00128 Car-Chr20:714388 2.24E-41 dispersed
Car20g00918 Car-Chr20:9974720 Car07g00775 Car-Chr7:4053735 1.54E-37 wgd
Car03g00973 Car-Chr3:7531698 Car07g00775 Car-Chr7:4053735 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00775 - - cmax:111478747 697.967