Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00781 ATGGACCCCCATCACCTCCCAAACCCCTCTCCCCATCTCCAATTTTCCGCCATCGACGATCCCGACATCGTTCACCTTCACCATGTTCACGAGCTTAGTTCTATTTGGCCGTCGTTGTTGTTGCCTCATCAACCGCTCCCTACCTCATCCACCCACCTGATGTCAGGCTACGGTAATGATCAAGAAGAGCCAGAAGAAGAGCTTGGTGCTATGAAGGAGATGATGTACAAGATCGCCGCGATGCAGCCAGTCGATATCGACCCATCAACTATTCGAAAACCCAAGAGACGAAATGTTCGAATTAGCGACGACCCACAAAGCATTGCCGCTCGTCTTCGTCGAGAAAGAATCAGCGAAAAGATCAGAATTCTTCAAAGGCTCGTCCCCGGAGGAACAAAAATGGATACAGCTTCAATGCTAGATGAAGCCATTAGGTATGTCAAGTTCTTGAAAAGACAAATCCAATTTCTTCAGTCAACTCAGCCGAGCACCGGTGACAGCGCAGTCGCCGGAGGGTGGCCATTTCCATTCCATAAGGCTAATACTTCAAACTCCTCGTCCACTTCCATGGAAGCTACTCCAACCATTATGCCATCAGGATGGTGA 606 49.17 MDPHHLPNPSPHLQFSAIDDPDIVHLHHVHELSSIWPSLLLPHQPLPTSSTHLMSGYGNDQEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIQFLQSTQPSTGDSAVAGGWPFPFHKANTSNSSSTSMEATPTIMPSGW 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4096880 4097559 + Carg05303-RA Car07g00781 152015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00781 201 MobiDBLite consensus disorder prediction 182 201 - -
Car07g00781 201 Pfam Helix-loop-helix DNA-binding domain 110 150 IPR011598 GO:0046983
Car07g00781 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 150 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00980 Car07g00781 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00402 Car-Chr2:3100912 Car07g00781 Car-Chr7:4096880 1.45E-46 dispersed
Car07g00107 Car-Chr7:683846 Car07g00781 Car-Chr7:4096880 9.57E-06 dispersed
Car07g00781 Car-Chr7:4096880 Car09g01018 Car-Chr9:6823919 5.96E-39 dispersed
Car03g00980 Car-Chr3:7568044 Car07g00781 Car-Chr7:4096880 5.38E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3882 PF00010 HLH 1.10E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00781 - - csv:101222266 301.982