Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00801 ATGGCAATTGACCAGGCTGAGCTTAGCACTGAGCAGGTTCTCACAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAATGGAACAAGCCTTCAGCTGTTAAGGCGTTACGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCTTATGTTCGTGTATTTGTTAGCATTTTACGAGATATATTTAAGGAAGAAACAGTGGAATATGTTTTAGCATTAATCGACGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCATGATGATTCTCTTGCTAGTGAAGATACTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTCATACAGGAGAAGAGCTGTAATATACTTGCTCTGATAGTGAGTGCTAGAAAAAAAACACATGATGGCAGTTATGCAAATGGTGATGCCTCGAACTCCAAGAGGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCCAGTCGTGCTGTACAGACTTCTGTCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAAGTCAAATCCTCCTTTGTCCAAGCAGATGGAGTGAAGCTGCTCATCCCTTTGATTTCTCCTGCGTCGACTCAACAATCTATTCAGATTCTGTATAAAACATGTTTTTGTGTTTGGCTTTTATCATATTATGAGCCGGCTATTGAATTCTTGGCCACTTCCAGAACCCTTCCAAGACTTATTGATGTCGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTCGTTATTTTGACCTTAAAGAACTTACTTCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAGTTGTTCAAAGTTTGAAATCCCAAGCATGGAGTGATGAGGACCTTTTGGATGCTTTGAATCAACTAGAAGAAGGGCTGAAAGATAACATCAAGAAACTAAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTAGGCCATCTTGACTGGTCTCCTATGCACAAAGACGTAAATTTCTGGCGCGAAAATATCACAAGCTTCGAAGAGAACGACTTCAAGCTATTGAGGGTCCTTATCACCATTCTGGATTCGTCGAGTGATCCAAGGGCTCTAGCAGTCGCTTGTTTTGATCTTTCCCAGTTCATTCAGCACCATCCTGCTGGGAGAGTTATAGTGACAGACTTGAAGGCGAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAAGTTACCAAATATTCCCTCCTCTGTATTCAAAGGCTGTTCCTAGGTGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1365 41.98 MAIDQAELSTEQVLTRDIPWETYMTTKLINGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDDSLASEDTYEPFLRLLWKGNWFIQEKSCNILALIVSARKKTHDGSYANGDASNSKRKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSVNCLATLLKEPKVKSSFVQADGVKLLIPLISPASTQQSIQILYKTCFCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLDALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDFKLLRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYSLLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4230520 4238593 + Carg05325-RA Car07g00801 152035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00801 454 CDD VATPase_H 4 448 - -
Car07g00801 454 Pfam V-ATPase subunit H 6 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Car07g00801 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
Car07g00801 454 Gene3D - 345 446 IPR038497 -
Car07g00801 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Car07g00801 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Car07g00801 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 - -
Car07g00801 454 Gene3D - 6 333 IPR011989 -
Car07g00801 454 PIRSF V-ATP_synth_H 2 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Car07g00801 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00801 Car-Chr7:4230520 Car14g00460 Car-Chr14:2410757 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00801 K02144 - csv:101217015 859.366