Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00809 ATGAATGATTTGTTTTCCTCCGATTCCTTCCGTCGGGATCCGCACCACCACTCCGTCGAGATGGCCCCCGATGTTCCGTCGTCAACAACTATCAATCTAAACAATTTCTTTGAAGACGTCGAGTCCGTGAAAGCAGAATTGGCGGAGCTCGAACGCCTCCATCGAAGCCTCCAGAATTCTCATGAACATAGTAAGACTTTGCATAACTCGAAGGCGATTAAGGATCTTCGATCTCGAATGGAATCAGATTTGACTTTGGCTTTGAAGAAAGCTAGGTTTATCAAGCTTCGATTGGAGGAACTCGACCGGTCCAATATCGAGAATCGGAATCTTCCTGGTTGTGGGTATGGCTCCTCTGCTGACCGATCTAGAACTTCCGTCGTCAATGGATTGAGGAAGAATCTTTGTGATTCGATGGAGAATTTCAACCGGTTGAGAGAGGAGATCTCGTCGACGTATAAGGAGACGATTGAACGAAGATATTTTACGATTACAGGGGAAAATCCCGATGAGAAGACGATCGATCTCTTGATCTCTACAGGTGAAAGCGAGACATTCCTACAAAAAGCCATACAGAAGCAAGGAAAAGGCAAAGTTCTAGAAACAATCCAAGAGATTCAAGAAAGACACGACGCAGTGAAAGACATTGAGAAGAACATGAAAGAGCTACACCAAGTGTTCATGGACATGGCGGTACTAGTCCAAACGCAAGGGCAGCATTTGGACGACATTGAGAGCCAAGTGACTCGAGCCAACTCCGCCATCAAGCGCGGTGCCACTGAGCTACAAACCGCAAGACACTACCAAAAAAACACCAGAAAATGGATGTGCATAGGCGGTGCTGCTTTTATATTTATCCTCTTCATCATTATTCTTTCTGTCGTCCTTGCCAACAAGAAGTAA 903 45.51 MNDLFSSDSFRRDPHHHSVEMAPDVPSSTTINLNNFFEDVESVKAELAELERLHRSLQNSHEHSKTLHNSKAIKDLRSRMESDLTLALKKARFIKLRLEELDRSNIENRNLPGCGYGSSADRSRTSVVNGLRKNLCDSMENFNRLREEISSTYKETIERRYFTITGENPDEKTIDLLISTGESETFLQKAIQKQGKGKVLETIQEIQERHDAVKDIEKNMKELHQVFMDMAVLVQTQGQHLDDIESQVTRANSAIKRGATELQTARHYQKNTRKWMCIGGAAFIFILFIIILSVVLANKK 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4283931 4284920 - Carg05333-RA Car07g00809 152043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00809 300 MobiDBLite consensus disorder prediction 1 25 - -
Car07g00809 300 MobiDBLite consensus disorder prediction 1 20 - -
Car07g00809 300 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Car07g00809 300 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Car07g00809 300 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Car07g00809 300 Pfam SNARE domain 241 291 IPR000727 -
Car07g00809 300 Coils Coil 33 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00809 Car-Chr7:4283931 Car13g00552 Car-Chr13:7435500 1.68E-112 dispersed
Car14g00335 Car-Chr14:1634408 Car07g00809 Car-Chr7:4283931 8.16E-130 wgd
Car06g00468 Car-Chr6:2592637 Car07g00809 Car-Chr7:4283931 4.67E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00809 K08486 - csv:101213443 481.1