Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00815 ATGAACGCCATGCAAGACACTGCTCTCCACCTCCTCTCCAATGGCGGATTCCTCCACCACTCTTCTCCTTCCTCTCTTTTCCCCTCTCTTTCCCGCTCCCGAACCCTCCAATTCCCCACCATTTCCAATGCCAAAACCGCCTTCATTTTGCCGTCTAAACTTCCCTCTCGCGCCCCCGACATTCCCCCTCTCTCGCCGCCGCTCCCTCCGCCGCCGTCTCACAGCGGCTCTCGCTCCGAGTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGTATCGATTTCCTTTCTGTCATTAAAGACCATCCTCCCGTTGCTACTGCCTCTCTTGCCGACATCAGATCCGCAGTCGATTTCATGACCTCGATGAATTTCACCGCCGTTGAGTTCCGCCGAATCGTTGGTATGTGCCCTGAGATTCTCACCTCTCGCGTTTCAGACATCGTTCCGGTGTTTACGTTCCTCCTTCGTGAGGCTAGAGTCGACGGTTCTGACATCAAACGCGTTATCAATCGACGCCCTAGGTTGCTTGCGTGTAGCGTGAAGAATCGGCTTCGTCCGACTATGTACTTCCTGCAAAGCATCGGTATATCTGAGGTACATAAACACACTTCTTTACTTTCCTGTAGCGTGGAAGAGAAATTGATTCCGAGAATCGAGTTCTTCGAGAACCTAGGGTTTTCTCGCCGGGACGCTGTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTGCAGCATCAAGGAGAATTTGGAGCCGAAACTGAATTACTTCGTGGTGGAAATGGGAAGAGAATTGAAGGAATTGAAGGAGTTCCCTCATTACTTCTCGTTTAGCTTAGAGAATAGGATTAAGCCGCGACATCAAATCTGTGTGGAGAAGGGCGTTTGTTTTCCATTGCCAGTGTTGCTGAAAACCAGTGAGATGAAATTCCGGGAAAAATTGGAGCTTCTCAACTTTCATGCCATTTCCATCTTCCTTCTCCAAATCCACTGTGTTTCATTTCTCTTGTCCCTTGGATTCTCCATGCGTGGCGGCGGTTCTCGAGCTCCGAACAGGTCGGAGCCACTGCCGCACTCCCAACCTGCTCAGATCCTGCCGCCTCTCAAGCGGCAGCTTGCTTTCGAGTTGTCTAGGCCGCCTGACTGCATTCATGATCAGAGTTCTTCAAAAGATGCTCTAAGTTTTGTACAGACACCTGTATCTGCAAAAGGCGGAAGGGTGTACAATAAGGCAAAGACTCCAAGAAGAGCTACGTCTGGGCCTGGAACACCTATCTCAGACACTAGCACTTATTCTCCTCTTACCCCAGCTGGAAACTGTCGACATGACAGTTCTTTAGGTCTTCTGACAAAAAAATTCATCAATTTAATTAAGCAAGCAAGGGATGGCATTCTTGACTTAAACAAAGCTGCAGAAACTTTGAAGGTGCAGAAAAGGAGAATATATGACATTACAAATGTTTTGGAAGGCATAGGTCTCATAGAAAAGAAGCTGAAAAACATAATATGTTGGAAGGGATTCAATGCCCAAAGTCCAGGAAATGTGGATAGTGATACTGCTATGTTGCAGGTGGATGTTGAAAACCTTTCTTTTGAAGAGCGTAGATTAGAAGATAAGATAAGTGCATTGCAGGAAAGACTGAGGAATCTGAGTGAAGATGAAAATATCCAAAAATGGCTCTTTGTGACTGAAGAAGACATTAAAGGCTTGCCTTGCTTTCAGAATGAAACGCTGATAGCAATTAAAGCTCCTCATGGAACCACATTGGAAGTTCCTGATCCCGATGAAGCTGTTGATGATCCACAGAGAAGATATAGAATAGTTCTTAGGAGCACGATGGGTCCTATTGATGTATATCTTGTCAGTCAATTTGAGGAGAAAATTGAGGAGATGAATGTGGTCCAGACACCTAGTAGTTTCCTACATGCTTCCAGTTCAGGATCAAACGAACATCTAGCAACAGAAGCAATTATTGGGGAGAGTAGTAGAAATGAAATCGAACCCCAAGCTCAACTGTCCCAGTACAGCAGCATCTGTGATGTGCATGGTTCAAACGAGTTTCCTGGTGGAATGATGAAGATTATGCCTTCAGAAATTGATAATGATGCAGATTACTGGCTGTTATCAGATGCTGAAGTTAGCATTACAGATATGTGGAGAACAGATACAGCAGATATTGTATGGGATCAGTCAGATATGGTTCCTCATGACTTCATAATATCTGATGTTAGTGCCCAAAGGCCAAGACCAGTAAGCCCACATTCAGAGAGGGGCGGAATGCCATCTGATGTTAACTTAAGACAAAGACATTATCAGGCCAGCAAGAGCATCAATGCACTGCTGAAGATTGTGGAAACCACAGAGTCCTAG 2373 46.1 MNAMQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPTISNAKTAFILPSKLPSRAPDIPPLSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSVKNRLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLPVLLKTSEMKFREKLELLNFHAISIFLLQIHCVSFLLSLGFSMRGGGSRAPNRSEPLPHSQPAQILPPLKRQLAFELSRPPDCIHDQSSSKDALSFVQTPVSAKGGRVYNKAKTPRRATSGPGTPISDTSTYSPLTPAGNCRHDSSLGLLTKKFINLIKQARDGILDLNKAAETLKVQKRRIYDITNVLEGIGLIEKKLKNIICWKGFNAQSPGNVDSDTAMLQVDVENLSFEERRLEDKISALQERLRNLSEDENIQKWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDDPQRRYRIVLRSTMGPIDVYLVSQFEEKIEEMNVVQTPSSFLHASSSGSNEHLATEAIIGESSRNEIEPQAQLSQYSSICDVHGSNEFPGGMMKIMPSEIDNDADYWLLSDAEVSITDMWRTDTADIVWDQSDMVPHDFIISDVSAQRPRPVSPHSERGGMPSDVNLRQRHYQASKSINALLKIVETTES 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4316011 4325790 + Carg05339-RA Car07g00815 152049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00815 790 Pfam E2F/DP family winged-helix DNA-binding domain 444 507 IPR003316 GO:0005667|GO:0006355
Car07g00815 790 Pfam E2F transcription factor CC-MB domain 523 623 IPR032198 GO:0046983
Car07g00815 790 Coils Coil 527 554 - -
Car07g00815 790 MobiDBLite consensus disorder prediction 59 79 - -
Car07g00815 790 MobiDBLite consensus disorder prediction 59 74 - -
Car07g00815 790 Pfam mTERF 156 311 IPR003690 GO:0003690|GO:0006355
Car07g00815 790 MobiDBLite consensus disorder prediction 407 434 - -
Car07g00815 790 MobiDBLite consensus disorder prediction 744 764 - -
Car07g00815 790 MobiDBLite consensus disorder prediction 420 434 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01015 Car07g00815 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00249 Car-Chr5:1391206 Car07g00815 Car-Chr7:4316011 2.94E-67 dispersed
Car07g00815 Car-Chr7:4316011 Car20g00133 Car-Chr20:743144 1.89E-63 dispersed
Car10g00143 Car-Chr10:685152 Car07g00815 Car-Chr7:4316011 3.03E-10 dispersed
Car13g00747 Car-Chr13:8510450 Car07g00815 Car-Chr7:4316011 1.31E-11 dispersed
Car18g00138 Car-Chr18:741325 Car07g00815 Car-Chr7:4316011 1.49E-11 dispersed
Car19g00641 Car-Chr19:7752592 Car07g00815 Car-Chr7:4316011 2.13E-22 dispersed
Car02g01097 Car-Chr2:7609956 Car07g00815 Car-Chr7:4316011 2.63E-144 wgd
Car03g01015 Car-Chr3:8427955 Car07g00815 Car-Chr7:4316011 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3884 PF02536 mTERF 4.30E-33 No_clan Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00815 K06620 - csv:101212480 1146.34