Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g00846 | ATGAGAAAGTTGAGATCTGTTGAACGCTATCGGAAACTGCGCGATTTGTTCTTGCATAAGTATAGATTCTTCGTTTTGAAGAAGGATATGGCGGAAGAACACAGATGCCAAGCACCTGAAGGTCACCGTCTCTGTGCTAATAATTGTGGCTTCTTTGGCAGTCCAGCCACCATGGATCTCTGCTCCAAATGTTACAGAGACTTTCGCCTCAAAGAACAAGAACAAGCCTCTACCAAATCCACCATCGAAGCCGCTCTCTCAGCCTCATCTTCTTCTTCTTCTCCTTCCTCTTTACTGATCGATCCTCCTCCCGTTTCCCCTGTTGTAGCCTTGCCTTCGCCGGACACAGATCTGACCATCCCGCCCCTTGCAGCGGCTGGATCTGAGGCGGTCATCCAGTCGTGCCCAAACCCGAACCCGAATCGGTGTTCGTCGTGCCGTAAGAAAGTCGGTTTGACCGGGTTCAGATGCAGATGCGGAATCACGTTCTGTGGAGCTCATAGGTACCCGGAGAAACACGGCTGCACCTTCGATTTCAAGTCAATCGGAAGAGAGGAGATCGCTCGTGCGAACCCCGTCGTGAAAGCCGACAAACTGGAGAGAATTTGA | 609 | 51.07 | MRKLRSVERYRKLRDLFLHKYRFFVLKKDMAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDFRLKEQEQASTKSTIEAALSASSSSSSPSSLLIDPPPVSPVVALPSPDTDLTIPPLAAAGSEAVIQSCPNPNPNRCSSCRKKVGLTGFRCRCGITFCGAHRYPEKHGCTFDFKSIGREEIARANPVVKADKLERI | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4478844 | 4479774 | - | Carg05370-RA | Car07g00846 | 152080 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g00846 | 202 | ProSiteProfiles | Zinc finger AN1-type profile. | 137 | 183 | IPR000058 | GO:0008270 | |
| Car07g00846 | 202 | Pfam | A20-like zinc finger | 43 | 66 | IPR002653 | GO:0003677|GO:0008270 | |
| Car07g00846 | 202 | Pfam | AN1-like Zinc finger | 143 | 179 | IPR000058 | GO:0008270 | |
| Car07g00846 | 202 | ProSiteProfiles | Zinc finger A20-type profile. | 39 | 73 | IPR002653 | GO:0003677|GO:0008270 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g01113 | Car-Chr2:7676480 | Car07g00846 | Car-Chr7:4478844 | 7.08E-57 | dispersed | |
| Car02g01277 | Car-Chr2:8562092 | Car07g00846 | Car-Chr7:4478844 | 4.88E-46 | dispersed | |
| Car07g00846 | Car-Chr7:4478844 | Car20g00144 | Car-Chr20:794304 | 2.44E-61 | dispersed | |
| Car17g00900 | Car-Chr17:7455034 | Car07g00846 | Car-Chr7:4478844 | 1.59E-06 | dispersed | |
| Car03g01050 | Car-Chr3:8588015 | Car07g00846 | Car-Chr7:4478844 | 2.10E-99 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g00846 | - | - | bhj:120073734 | 280.796 |