Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00867 ATGGGATCTAATACATGTGAAATTGTTGAAGCAAGGGAAGAAATTAAGGCTGTTCAAAGTAAGGTAGAATCTCGTCATTCGGATTTTGTATCTCACCGAGATCGGAAACTTTCTGCATTGAAAATTGGATTCAAGGGATTTCTAGAGGATGATATCAATCAGCTTTTTGAGTCGATTAGTATTAAAAATGCATCCAAGAGCTTAGGTCATTCACAAGTAGATGTAAATGCGCTGAGAAAAAGTACGCTAAAGAAGCCAATAAGTGTTGGCATGCCTCGCTCGCCAGGTATTGGTACTTCTGATTCTGGTAGTTTGAAGCAGGCACTCAGGGAACTGTGCCTTTCAAAGGCATCTGAGATGGCTGCTATGAAAAGATCATCAAAACCAGCTACCTTGTCAAGACTCTCGGAAGCTGGTCGGATCAAGACATTGTACAATTCCGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCGGATAACGGTAAGGGGGGGCGTGTGGTCGAAATATCCCTGGTTCCAGAGGGCAAAAAAAAGAACGTTGAGCAGAGACTTGAGCATGTCCAAGCATCTGCTGTTAAATCACCTGCTGAAAGTTCTCATTCTTCTCCTCAGTTCACGGTTACGAAAACACAAAGTTCTATTGAGGTTGGTACTGTCGAACAAAACGTCAATACCACTCTGTCAAGGAAAGTTGGACCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAGGAGTCCATTACCCCACCATCTATATCTTCTTGTACGATTAAGAAGGTATTAGATAAGGAGAAGAAGATTCTTGTCTCGAGCAGGGTAGGAAATAAAGTGTCATCATCCAAGGCTGGACGGAAAGGTCGGCTGCAAACTGCTTCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAAGCAAGTTATCTAGAAGTAATTCCTGTTCGATCAAACCAGTTATTCGGAACAAGGGGCTGGTTAAAAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTAAATGGCGACACGGATCCTAGTAAAAAGAAGTTGATATGTGAGAGGTGCCACTGCGCATTGAACAGTGCAGCTAAAGACTCGAAGAAGGGCTCTGCCTCCCAGTTTAGTGCTCTTGGTACTGATGTAAATAATGCTAGTTCAAAATCTGGTGCTAACAAATCAGGCATCATGGATGGCAAGGCTTCTGATGTTCGAGTAAAAAAAAATACAAGGGTACGAGATAAGGGTGAGTTCTCTCAAAGCTCAAAAAGTAGTCAAGGCGAGTACAGTAGCAGTACTACGAGTATTATAAGTGATGACTGCAATGGGCATGGATCGAGTAATGGTAACAGACCTCATATGTCGAAAGATGTAAGGTGGGAAGCCATACGTCACGCACAATTGCAGCATGGGGTTCTCAGCTTGAGGCATTTCAATCTCTTAAAGAAGCTTGGTTGTGGGGACATTGGAACGGTGTATCTTGCCGAGCTAACTGGCACTAATTGCCTATTTGCCATTAAGGTCATGGACAACGAGTTTCTAGCAAGACGGAAGAAAATGCCGAGAGCGCAAACCGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCAACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTCATGGAATATTGTCCTGGTGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTCGGCCGAGTTTTTCCTGAGCCTGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCCTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCCGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTCACCGACTTCGACTTGTCGCTTAGGTGCACGGTCTGTCCAACACTCCTGAAGTCATCATCCTCCGATTCAGACTCGGCGAAGACATCAGGTCCATGTACAGATTCTAGTTGTGCTGAGCCTTTTTGCATTGAACCATCATGCCAAGTCCCATGCTTCAGCCCAAGGTTCTTACCAGCTGCTTCCAAAACAAGGAAGTCAAAACCCGACCTCACAACTCAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACCGATGCACGATCAAATTCCTTCGTTGGCACTCACGAGTATTTGGCACCGGAGATCATCAAAGGAGAGGGTCATGGAGCTGCAGTCGATTGGTGGACGTTTGGTGTTTTTCTCTATGAACTTCTATATGGTAGAACCCCTTTCAAGGGATCCAACAACGAAGAGACATTAGCCAATGTAGTATTGCAGAGCCTCAGTTTCCCCGACAGCCCAATCGTTAGTTTCCAAGCAAGGGATCTCATCCGTGGGCTGTTGGTGAAGGAGCCTGAAAGTCGATTCGGGACAGAGAAAGGAGCTGCTGAAATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCGTTGATCCGTTGTGCAATACCTCCAGAAGTCCCGGAGGTATGTGATATGGACATTCCAAGCATGATTTCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCGACTGGAGAGCACTTGGAGTTCGAATTGTTCTAG 2604 44.78 MGSNTCEIVEAREEIKAVQSKVESRHSDFVSHRDRKLSALKIGFKGFLEDDINQLFESISIKNASKSLGHSQVDVNALRKSTLKKPISVGMPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKPATLSRLSEAGRIKTLYNSVMVEATESGSSSDNGKGGRVVEISLVPEGKKKNVEQRLEHVQASAVKSPAESSHSSPQFTVTKTQSSIEVGTVEQNVNTTLSRKVGPQTLKAELEKEEESITPPSISSCTIKKVLDKEKKILVSSRVGNKVSSSKAGRKGRLQTASSSKLGSGNKVSKLSRSNSCSIKPVIRNKGLVKKKVKQDLSSPTCSSSTYNAVNGDTDPSKKKLICERCHCALNSAAKDSKKGSASQFSALGTDVNNASSKSGANKSGIMDGKASDVRVKKNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDCNGHGSSNGNRPHMSKDVRWEAIRHAQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVCPTLLKSSSSDSDSAKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAASKTRKSKPDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLSFPDSPIVSFQARDLIRGLLVKEPESRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPEVPEVCDMDIPSMISQQNKFRYLESKSTGEHLEFELF 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4623377 4626632 - Carg05391-RA Car07g00867 152101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00867 867 MobiDBLite consensus disorder prediction 405 423 - -
Car07g00867 867 ProSiteProfiles Protein kinase domain profile. 483 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00867 867 Pfam Protein kinase domain 484 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00867 867 Pfam Protein kinase domain 713 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00867 867 MobiDBLite consensus disorder prediction 385 439 - -
Car07g00867 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Car07g00867 867 MobiDBLite consensus disorder prediction 273 308 - -
Car07g00867 867 MobiDBLite consensus disorder prediction 191 210 - -
Car07g00867 867 MobiDBLite consensus disorder prediction 193 210 - -
Car07g00867 867 MobiDBLite consensus disorder prediction 424 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01124 Car-Chr2:7744738 Car07g00867 Car-Chr7:4623377 1.31E-113 dispersed
Car02g01125 Car-Chr2:7751331 Car07g00867 Car-Chr7:4623377 0 dispersed
Car07g00867 Car-Chr7:4623377 Car20g00154 Car-Chr20:868294 0 dispersed
Car03g01056 Car-Chr3:8614273 Car07g00867 Car-Chr7:4623377 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88998 PF00069 Pkinase 6.90E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00867 - K08286 csv:101210027 1476.07