Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00873 ATGCGCCTCTTCTTTTGCCTCATCTCCTTCTTACTCTCCTTCTTCCTCACCGGCACGGTCCCCGTCTCCGCCGCCGCCGCCTTCTCCGCCCACCATTTCCCTCTCCACAGAGCTTTCCCCCACCCTCCCACTCCCCATTTTCATTCCCTCAGAGCTCGCGACCGTCTCCGCCATTCCCGCGTCTTGCGCCGATTGCGTGGTGGCATCGTCGACTTCTCCGTTAAAGGCTCCTCCGATCAATTCGTCGGGCTTTATTACACCAAAGTGAAGTTGGGCAATCCCCAGAGGGAATTCAACGTGCAGATCGATACTGGGAGTGACATTTTGTGGGTCAATTGCAGTCCTTGCGATGGTTGTCCCCAATCAAGCGGACTTGGAATAGAACTCAACTTGTTTGATACTGCAATGTCGTCGTCTGCTAGGCTGGTTTCCTGCTCTGATCCAATATGTTCTGCAGTTCCGACCATCACAAATCAATGCTTATCCCAGAATGACAACTGCAATTACACCTTCCAGTATCGAGATAGAAGTGCGACGTCGGGCTTTTATGTTACTGATTCAATGTATTTTGATATGATTCTTGGGGAGTCTGTGATTGCAAACTCCTCAGCCGCTATTGTTTTTGGGTGTAGCATATATCAGTATGGGGATTTGACTCGAACAACCGTAGCACTTGATGGAATTTTTGGATTTGGTCGAGGGGAGTTTTCAGTTATATCACAATTATCGTCTCGAGGGATAACACCGAAAGTTTTCTCTCACTGTTTGAAAGGAGGGGAAAATGGAGGGGGTATCTTGGTTCTTGGTGAGATTCTGGAGCCCAGCATTGTTTATAGTCCACTTATTCCATCTCAGCCGCACTATACCTTAAATCTACAGAGTATTGCAATCAGCGGGCAACCATTTCCAAATCCCACAGTTTTTTCAATATCAAATGCAGGAGGAACCATTATTGACTCTGGAACAACTTTAGCATATCTTGTGGAAGATGTTTACAACTGGATTGTCTCTGTAATAACTTCTGCTGTTTCTCAATCAACCACCCCTACAATTTCCAGGGGTAGCCAATGTTATCGAGTCTCGACAAGTGTATCAGAAGTATTTCCTGTGATCAGCTTTAATTTTGAGGGTATTGCATCCATGGTGCTGAAACCTGAAGAATATCTTCAGTTTGACAGCATAGAACCTGCTTTACGGTGCATCGGTTTTCAGAAAGCCGAGGATGGAATAAATATTTTAGGAGATCTTGTTTTGAAAGATAAGATCGTCGTCTATGACTTAGCTCGACAACGAATCGGATGGGCCAATTATGACTGTTCATCGTCTGTAAACGTTTCTGTAACGTCTGGGAAGGACGTGTTCATCGATGGACAGCTGAGTGTCAGCAGCTCCTCAAGAAAGCATTTCTATCAGCTGCTCCACATCGTCGTTGTACTACTAATACATTTGAAACTGTTCTGA 1461 45.65 MRLFFCLISFLLSFFLTGTVPVSAAAAFSAHHFPLHRAFPHPPTPHFHSLRARDRLRHSRVLRRLRGGIVDFSVKGSSDQFVGLYYTKVKLGNPQREFNVQIDTGSDILWVNCSPCDGCPQSSGLGIELNLFDTAMSSSARLVSCSDPICSAVPTITNQCLSQNDNCNYTFQYRDRSATSGFYVTDSMYFDMILGESVIANSSAAIVFGCSIYQYGDLTRTTVALDGIFGFGRGEFSVISQLSSRGITPKVFSHCLKGGENGGGILVLGEILEPSIVYSPLIPSQPHYTLNLQSIAISGQPFPNPTVFSISNAGGTIIDSGTTLAYLVEDVYNWIVSVITSAVSQSTTPTISRGSQCYRVSTSVSEVFPVISFNFEGIASMVLKPEEYLQFDSIEPALRCIGFQKAEDGINILGDLVLKDKIVVYDLARQRIGWANYDCSSSVNVSVTSGKDVFIDGQLSVSSSSRKHFYQLLHIVVVLLIHLKLF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4687123 4691427 - Carg25571-RA Car07g00873 152107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00873 486 Pfam Xylanase inhibitor C-terminal 287 435 IPR032799 -
Car07g00873 486 ProSiteProfiles Peptidase family A1 domain profile. 85 435 IPR033121 -
Car07g00873 486 Pfam Xylanase inhibitor N-terminal 85 269 IPR032861 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00365 Car07g00873 CCT
Car06g00365 Car07g00873 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00873 Car-Chr7:4687123 Car10g00774 Car-Chr10:4171632 2.47E-94 dispersed
Car14g00231 Car-Chr14:1082388 Car07g00873 Car-Chr7:4687123 0 wgd
Car02g01148 Car-Chr2:7876461 Car07g00873 Car-Chr7:4687123 9.61E-177 wgd
Car20g00475 Car-Chr20:2649940 Car07g00873 Car-Chr7:4687123 5.55E-134 wgd
Car06g00365 Car-Chr6:2000531 Car07g00873 Car-Chr7:4687123 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00873 - - csv:101205203 745.732