Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g00883 | ATGGTCCGATCAAGTCCGACGCATTACGGATACCGTACGAAATCGGACGGCGACGGGATCTCGATCTTCGGGTCTAAGGATATATGGATTGACCATTGTTCGCTCTCGCATTGCAAGGATGGGCTGATTGATGCGGTGATGGGCTCCACCGGAATCACGATTTCAAACAATTATTTCTCGCATCACGATGAGGTTATGTTACTAGGTCACAGTGACAGCTACTCGCCGGACTCCGGAATGCAGGTAACAATAGCATTCAACCACTTCGGCGAGAAGCTTGTGCAAAGGATGCCACGGTGCCGGCGAGGCTACATCCACGTGGTCAACAACGACTTCACCCAATGGGAAATGTACGCAATCGGCGGCAGCGGGAACCCCACAATCAACAGCCAAGGCAACCGCTACACCGCCCCATACGACCGCAACGCCAAGGAGGTAACCAAACGTGTAGAGACCGCCGAGTCCGAGTGGCGCGGCTGGAACTGGCGCTCTGACGGCGACATCCTCGTCAACGGCGCCTTCTTCATCACTTCCGGCCAAGGCCTCGAAGTCAAGTACGAGAAGGCTTACAGCGTCGAGCCCAAGTCCGCCGCCCTAATCGACCAGCTCACCTGGCACGCCGGTCCACTCGGCGTCGGCAGTAGGGACAACAATTTGGGCATGTGGACCACTGGCTCTAATCGTGGTGGTGGCTTTGTTCTTGGGTCTGGCCCGGATTACACTGACGACATGTCGGAAAGCCTCTCGCGGATCCGGTTTCGATATTTTGTTATGGTATTTTCTTTCTGTGCATTGGCACTTGCCTTTGTGCCATGA | 816 | 55.15 | MVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDSYSPDSGMQVTIAFNHFGEKLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETAESEWRGWNWRSDGDILVNGAFFITSGQGLEVKYEKAYSVEPKSAALIDQLTWHAGPLGVGSRDNNLGMWTTGSNRGGGFVLGSGPDYTDDMSESLSRIRFRYFVMVFSFCALALAFVP | 271 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4738589 | 4739479 | - | Carg25561-RA | Car07g00883 | 152117 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g00883 | 271 | Pfam | Pectate lyase | 14 | 133 | IPR002022 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car07g00883 | Car-Chr7:4738589 | Car04g02458 | Car-Chr4:19559525 | 4.53E-120 | dispersed | |
| Car03g01085 | Car-Chr3:8811951 | Car07g00883 | Car-Chr7:4738589 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g00883 | K01728 | - | csv:101203012 | 501.516 |