Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00909 ATGCGATTCAAGATGGCGTTCGAAACCGAGGACTCTTTGCGGATAAGCTGGTTCATGGGTACCATAAACACCGTTCAGGCCGCCGACCCACTGCGCTGGCCTGAATCACCATGGAGGCTTCTACAGGTTACTTGGGACGAGCCCGATTTACTTCAGAATGTGAAACGTGTTAGCCCGTGGTTGGTCGAATTGGTATCGAACATATCTCCGATTCATCTTGCACCGTTCTCACCTCCAAGGAAAAAGTTCAGATATCCACAACACCCTGATTTCCCCCTCGATAACCAGCCTTCTATGTCGCCGTTCGCGAGTTATCTCCATGGTCCAGGCAGCCCCTTCGGTTGTCCTCCGGACAACAACCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTTTGGTCTATCCTTGTCGGATTTTCATCTCAGTAAACTGCAGTCGGGTCTGTTTCCGATTCGTTATCGATCACTGGATCCAGCTGCTGGATCAACTAGACTTTCTGGTAATGCAATGACTGAAAAGCCAAGTATGAGTGAAAATGTATCTTGCTTGCTAACCATGGCGCATTCTACTCAAACGTCGAAGAAATTCGACAACGTAAAGACTCCACAGCTAATACTTTTCGGCAGACCCATACTAACCGAATTGCAGATGTCTCAAAGCTGTTCTGGTGATACCGTTTCTCCAGTTGGTACTGGAAACAGTTCGTCGGATGGAAACGGTTCTGGATCTGCACTACATCAACAAGGTCTACCAGAACGCTCGTCTTGCGAAAATTTCCAATGGTACAAGGACAATCGCCAAGATGTCGAGCCTAACTTGGATACTGGCCACTGTAAAGTCTTCATGGAATCAGAAGACGTCGGTCGCACCCTCGATCTTTCTTCACTTGGGTCCTATGAAGAATTGTACAGAAAACTCGGAAACATGTTCGGCATCGATAACTCAGAGATGTTGAACCATGTCTTGTACCGGGATATCTCCGGTGCTGTCAAGCACGTCGGCGACGAACAATTCAGCGAGTTCATCAAGACAGCAAGAAGATTGACAATTCTAACAGATTCAGGAAGTAACAATGTAGGAGGTTAG 1086 47.79 MRFKMAFETEDSLRISWFMGTINTVQAADPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNISPIHLAPFSPPRKKFRYPQHPDFPLDNQPSMSPFASYLHGPGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHLSKLQSGLFPIRYRSLDPAAGSTRLSGNAMTEKPSMSENVSCLLTMAHSTQTSKKFDNVKTPQLILFGRPILTELQMSQSCSGDTVSPVGTGNSSSDGNGSGSALHQQGLPERSSCENFQWYKDNRQDVEPNLDTGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSEMLNHVLYRDISGAVKHVGDEQFSEFIKTARRLTILTDSGSNNVGG 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5025676 5027640 + Carg25788-RA Car07g00909 152143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00909 361 Pfam Auxin response factor 1 42 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car07g00909 361 ProSiteProfiles PB1 domain profile. 275 355 IPR000270 GO:0005515
Car07g00909 361 MobiDBLite consensus disorder prediction 218 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00909 Car-Chr7:5025676 Car15g00425 Car-Chr15:2215835 8.64E-79 dispersed
Car02g00643 Car-Chr2:4856852 Car07g00909 Car-Chr7:5025676 7.19E-131 wgd
Car20g00432 Car-Chr20:2434138 Car07g00909 Car-Chr7:5025676 1.44E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00909 - - csv:101217039 664.84