Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00926 ATGGACGAAAAATTAGCCAAATCTATTGATATCCGCGAATCTTTTGTAAAAGTCAATGATGAATCTACATCAATGCCAACCCTGATGAGTGCTAATGCCGACAGGCACAAAGTGAAAGAGTTAAGAGGACCAAATTGTAACGCACAGGATGGGAATGGAAGTGTGAACGATGGTGTGTCTGGAAGGGAACAGAGACCGGTGGAGGAAAATGAGTTGAAGGTCAATGGATTGACTAGAAATGCAGAAGATGGGCGAAATCCTACTGTTCAAGCCCAGGACATTGTACAAATACAACAGCAACAGCAGCCTCAAGGATCTATGGTCTGCTGGGAGAGATTTCTACATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAACGATGACTCCACTCGCCATCTAGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTTATTGCAGCTGCAAATGGACTACACGCATGGAAGGTGCTAGAAGATCTGACAAATCACATAGATCTTGTCTTAACAGAGGTGGTCATGCCTTGCTTATCGGGCATCGGTCTTTTATGCAAGATTATGAGCCATAAAACAAGGAAGAATATACCTGTGATTATGATGTCTTCTCATGACTCAATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTCGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGTCATAGTTCTAGCGGTAGTGGAAGTGAAAGTGGCACGCAGACCCAAAAATCTGTGAAGTCAAAAAGTGTTCAAAAATCAGATAACAACACCGGGAGCAATGAAGAAGAAGAAGACAATGAGAGCATTGGCTTCAATATTGGAGATGGAAGTGACGATGGCAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAGGTTGAAAGCCCTCGACCAGTATCTGCATCAGCATGGGATCAAAAGCGTGAACGTCCTGATAGTACTTGTGCTCAAGTTGTCCACTCAAATGCTGATGCATTTGGTAATAACGTGCCACCTGTTTTGACAGCCGAGTGCCAGGTGCAGAAAAAGCAACTTGAAACTGTTTCCGTGGGTAGAGTTGAATTAGGCGTGCACATAAATCTAGATTTACAACTTGAACTGTCTGCGGAACATCCAACCAAGCTAGCTAACAGACAACAGAATATTATGCTCGAGATAGGATCCAATGGATTTAATGAGCAGTTCAACAAAGGACAGCTTGACCTCAACTCTGAGAATCCATCCAGCAAACTCAAGTACGAACAAACAAATGTTACTGGTCTTGCTACAAATCTTAAAGATTCTAAGTTGGATGTCACAGTGTTTGAGGCACCAACCAGCAATCCCAAGATAGACATTAAGAATAAAGATGTTACAGATTCAGGAGAATTTCCATCCCTTGAGCTTGGATTAAAAAGGCTTAGAGGAGTTCAAACGACAGGGAAAGCAGACCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCTTTTTCTAGGTACAATGCTGGCTCAAATTCTAACAAGACTCGAACTGGGAATGCTGGAAGTAACTCTTCTCCTGTTCTTGGCTTAGAAGTTACAAACCAAGAGAACATGCAAGATATTCGATCTCATTCGAGTGGTAATCCTCCCAATCAATGCTCAAATGGAGATAGCAATAATATTGACATGGGGTCCACTACGAATAATGCATTTTCCAAGTCCATAGTCACTAATAACAAGTCAGCAATGGCATCCACAGTCAACTGTTTGAACCCGTTGGCCCAACCTATTAAGAATGACAGTCTATCT 1821 42.23 MDEKLAKSIDIRESFVKVNDESTSMPTLMSANADRHKVKELRGPNCNAQDGNGSVNDGVSGREQRPVEENELKVNGLTRNAEDGRNPTVQAQDIVQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKVLEDLTNHIDLVLTEVVMPCLSGIGLLCKIMSHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVQKSDNNTGSNEEEEDNESIGFNIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRERPDSTCAQVVHSNADAFGNNVPPVLTAECQVQKKQLETVSVGRVELGVHINLDLQLELSAEHPTKLANRQQNIMLEIGSNGFNEQFNKGQLDLNSENPSSKLKYEQTNVTGLATNLKDSKLDVTVFEAPTSNPKIDIKNKDVTDSGEFPSLELGLKRLRGVQTTGKADQDERNVLRRSDSSAFSRYNAGSNSNKTRTGNAGSNSSPVLGLEVTNQENMQDIRSHSSGNPPNQCSNGDSNNIDMGSTTNNAFSKSIVTNNKSAMASTVNCLNPLAQPIKNDSLS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5144168 5152022 + Carg25805-RA Car07g00926 152160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00926 607 MobiDBLite consensus disorder prediction 42 68 - -
Car07g00926 607 MobiDBLite consensus disorder prediction 243 328 - -
Car07g00926 607 MobiDBLite consensus disorder prediction 291 306 - -
Car07g00926 607 MobiDBLite consensus disorder prediction 503 532 - -
Car07g00926 607 Pfam Response regulator receiver domain 121 232 IPR001789 GO:0000160
Car07g00926 607 MobiDBLite consensus disorder prediction 243 270 - -
Car07g00926 607 MobiDBLite consensus disorder prediction 544 570 - -
Car07g00926 607 MobiDBLite consensus disorder prediction 486 532 - -
Car07g00926 607 ProSiteProfiles Response regulatory domain profile. 120 238 IPR001789 GO:0000160
Car07g00926 607 MobiDBLite consensus disorder prediction 487 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00409 Car-Chr3:4742002 Car07g00926 Car-Chr7:5144168 0 dispersed
Car03g00410 Car-Chr3:4749477 Car07g00926 Car-Chr7:5144168 6.51E-46 dispersed
Car07g00926 Car-Chr7:5144168 Car12g00620 Car-Chr12:4209855 2.06E-50 dispersed
Car07g00926 Car-Chr7:5144168 Car07g00932 Car-Chr7:5243918 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3891 PF00072 Response_reg 2.80E-20 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00926 K12129 - csv:101210765 926.006