Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00947 ATGGGAAACGCCCATGGCCACCGCAAGCATTTCAACCATGGTGTAAATTCCTCTCCATCCACTAACGCTTATTCTCCCTCCAATAAATATACGCCATCTGGATCAGCTCCTTCAATTTCGACCTCCTCCACGGCTGAGATGGAATCCTTGCCCTATGCCCTCGTTGATTCGAGTCTTCGTGCCCTTGCCGGTCAGGCCGAGGGATTTGGCCGCGCTGCCATTGGTGGTCTCCATGGGTCTGTTTATTGCGTTACTAATTTGGAAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCTCTTTGGATTATCTTCGAAGTTTCGGGCACAATTCACTTGTCTTCGTATTTGAATGTGTCATCTTTTAAGACTGTAGACGGTCGTGGTCAAAGGATAAAGCTTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATATTGATGGAATTCAAATTAAACCGAATTCCCGCCACATATGGATAGACCGATGCAGCCTCCAAGACTACGACGACGGGTTGATTGATATCACCCGGGGAAGTACAGATATCACTATTTCTAGGTGTCGTTTCTCACGGCATGACAAAACAATGCTCATTGGAGCCGATCCCTCTCACGTTGGCGACCGATGTATCCGTGTAACTATCCACCACTGTTTTTTCGATGGTACACGTCAGCGACATCCACGTGTTCGATATGGTAAAGTACATCTTTACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGCGTAGAATCACAGATACACTCTCAGTGCAACATATACGAAGCGGGTCAGAAAAAGGTGGCGTTCAAATATCTAACTGAGAAGGCAACAGACAAGGAAGAACCTTCAAGTGGGTGCATATGGTCTGAGGGAGATTTATTTGTAAGTGGCACTCAAAGTGGGCTGCTGGCTGCCACCGCCGGACAAAGCATGTTTCATCCTTCAGATCATTACTCTGCTTGGACTGTGGAACCTCCCACCGATGCTCTGAAACAGATACTCCAACATTGTACTGGTTGCCAAAACATCCCTAGGCCCTGTGATCTGCCACTGGTACCTTAG 1134 47.0 MGNAHGHRKHFNHGVNSSPSTNAYSPSNKYTPSGSAPSISTSSTAEMESLPYALVDSSLRALAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYLNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWIDRCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKATDKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQHCTGCQNIPRPCDLPLVP 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5353813 5357456 + Carg24348-RA Car07g00947 152181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00947 377 MobiDBLite consensus disorder prediction 13 42 - -
Car07g00947 377 MobiDBLite consensus disorder prediction 1 42 - -
Car07g00947 377 Pfam Pectate lyase 121 282 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00947 Car-Chr7:5353813 Car03g00499 Car-Chr3:5130987 6.08E-52 dispersed
Car03g00396 Car-Chr3:4679153 Car07g00947 Car-Chr7:5353813 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00947 K01728 - csv:101219724 681.404