Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00952 ATGAATATCCAAGTTAGCCGATGGTGTGCCTCAGCCAAACCTTTCCTGTCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCAAAAGCAGCTCTCAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAGTCTTTGCCAAGCTAATAGTCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGTATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCTGCCATAACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCGAAGATAGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATTAAGGGCCCAATTTTAGAGCTATTTTGGGTAAACGAAAAAGCAGATCATCAACAACAACAAAGGGGTGATATCAGCCTTCAACACACAATCAAAGGCTCAATTATGATCACAATTGGCTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCCGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGTTGGGCACCGCGGAGGGCACTGTGTTGGCGCTGGTGATGGAAAGAGGAAATGCCGCCGTTTGGAGCATTACTTGGGGAACTAAACTGCTCGCCGCTGTTTATAGTGGAATATTCTGTTCAGGACTTGCTTATTACATTCAAGGAATAGTGATGAAAGACAAAGGACCTGTCTTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTTGCCATTATGAGTTCGTTCATTCTCGGCGAGCGTCTTTACTTCGGAAGGGTACTTGGAGCTGGTGTGATAATTGTAGGGCTATACCTTGTGGTTTGGGGCAAAAACAAAGATGGAAATGGCTCAAGTGAAGACCTCAAATTGCCCACCAAACAAACCCAAGAAATTGAAGCATAA 1062 44.26 MNIQVSRWCASAKPFLSVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLIVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKIVGTIATVGGAMIMTLIKGPILELFWVNEKADHQQQQRGDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAGVIIVGLYLVVWGKNKDGNGSSEDLKLPTKQTQEIEA 353
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 5393100 5395498 - Carg24353-RA Car07g00952 152186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car07g00952 353 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020|GO:0016021
Car07g00952 353 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Car07g00952 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 332 - -
Car07g00952 353 PANTHER WAT1-RELATED PROTEIN 9 336 IPR030184 GO:0016021|GO:0022857
Car07g00952 353 PANTHER WAT1-RELATED PROTEIN 9 336 - -
Car07g00952 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01163 Car-Chr4:6685745 Car07g00952 Car-Chr7:5393100 3.63E-126 dispersed
Car07g00952 Car-Chr7:5393100 Car09g00716 Car-Chr9:4243046 2.01E-131 dispersed
Car08g00964 Car-Chr8:6434362 Car07g00952 Car-Chr7:5393100 3.74E-55 dispersed
Car15g00306 Car-Chr15:1655257 Car07g00952 Car-Chr7:5393100 9.08E-22 dispersed
Car03g00388 Car-Chr3:4644935 Car07g00952 Car-Chr7:5393100 6.35E-29 wgd
Car04g01101 Car-Chr4:6343998 Car07g00952 Car-Chr7:5393100 3.78E-148 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00952 - - csv:101217902 632.484