Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g00952 | ATGAATATCCAAGTTAGCCGATGGTGTGCCTCAGCCAAACCTTTCCTGTCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCAAAAGCAGCTCTCAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAGTCTTTGCCAAGCTAATAGTCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGTATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCTGCCATAACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCGAAGATAGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATTAAGGGCCCAATTTTAGAGCTATTTTGGGTAAACGAAAAAGCAGATCATCAACAACAACAAAGGGGTGATATCAGCCTTCAACACACAATCAAAGGCTCAATTATGATCACAATTGGCTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCCGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGTTGGGCACCGCGGAGGGCACTGTGTTGGCGCTGGTGATGGAAAGAGGAAATGCCGCCGTTTGGAGCATTACTTGGGGAACTAAACTGCTCGCCGCTGTTTATAGTGGAATATTCTGTTCAGGACTTGCTTATTACATTCAAGGAATAGTGATGAAAGACAAAGGACCTGTCTTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTTGCCATTATGAGTTCGTTCATTCTCGGCGAGCGTCTTTACTTCGGAAGGGTACTTGGAGCTGGTGTGATAATTGTAGGGCTATACCTTGTGGTTTGGGGCAAAAACAAAGATGGAAATGGCTCAAGTGAAGACCTCAAATTGCCCACCAAACAAACCCAAGAAATTGAAGCATAA | 1062 | 44.26 | MNIQVSRWCASAKPFLSVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLIVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKIVGTIATVGGAMIMTLIKGPILELFWVNEKADHQQQQRGDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAGVIIVGLYLVVWGKNKDGNGSSEDLKLPTKQTQEIEA | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5393100 | 5395498 | - | Carg24353-RA | Car07g00952 | 152186 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g00952 | 353 | Pfam | EamA-like transporter family | 23 | 135 | IPR000620 | GO:0016020|GO:0016021 | |
Car07g00952 | 353 | Pfam | EamA-like transporter family | 188 | 327 | IPR000620 | GO:0016020|GO:0016021 | |
Car07g00952 | 353 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 234 | 332 | - | - | |
Car07g00952 | 353 | PANTHER | WAT1-RELATED PROTEIN | 9 | 336 | IPR030184 | GO:0016021|GO:0022857 | |
Car07g00952 | 353 | PANTHER | WAT1-RELATED PROTEIN | 9 | 336 | - | - | |
Car07g00952 | 353 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01163 | Car-Chr4:6685745 | Car07g00952 | Car-Chr7:5393100 | 3.63E-126 | dispersed | |
Car07g00952 | Car-Chr7:5393100 | Car09g00716 | Car-Chr9:4243046 | 2.01E-131 | dispersed | |
Car08g00964 | Car-Chr8:6434362 | Car07g00952 | Car-Chr7:5393100 | 3.74E-55 | dispersed | |
Car15g00306 | Car-Chr15:1655257 | Car07g00952 | Car-Chr7:5393100 | 9.08E-22 | dispersed | |
Car03g00388 | Car-Chr3:4644935 | Car07g00952 | Car-Chr7:5393100 | 6.35E-29 | wgd | |
Car04g01101 | Car-Chr4:6343998 | Car07g00952 | Car-Chr7:5393100 | 3.78E-148 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g00952 | - | - | csv:101217902 | 632.484 |