Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00960 ATGAGCGTGAACATAACCTCCATTAAAACCGCCTCCAACGGCGTCTGGCAAGGCGACAATCCACTCAATTTCGCCTTCCCTCTTTTGATCCTTCAATCCGTTTTGATTCTCCTCCTCACCCGCCTCCTCGCCGCCGTCCTCAAGCCCCTCCGCCAGCCCAAAGTCATCGCCGAAATCCTCGGCGGGATTCTTCTGGGTCCCTCTGTTTTTGGTCGGAATCAAGTTTATTTGAACTGGGTTTTTCCGGATTGGAGTACTCCGATTCTTGAATCGGTTGCTAGTATTGGGTTGTTGTTCTTTTTGTTTTTGGTTGGATTGGAACTCGATTTGTCCTCTGTTCGCCGTAGTGGGCGGCGGGCTTTTGGAATCGCCGTCGCTGGAATCTCCGTTCCTTTCCTCTCCGGCACCGGCATCGCCTTTGTACTTCGGAAAACCGTCGCCGGTGCCAATAACGTCGGGTACTGGCAATTTGTTGTGTTCATCGGCGTTGCTCTGTCCATTACTGCTTTTCCTGTTCTGACGCGCATTTTAGCGGAGCTTAAGCTTCTCACCACCGAAGTCGGCGAGATTGCCATGGCGGCCGCCGCATTCAACGACATGGCTGCTTGGATTCTCCTCGCACTCGCCATTGCTCTAACGGGCAACGACAACTCTGTTACAGTACAGAGAAGTTCGTTAGTTTCCGTGTGGGTCCTACTCTCTGGAGCTGGATTTGTCGTTTTCATGATGACGGTGGTCCGACCAGGAATGAAGTGGGTTGCACGGCGGTGTTCGTACGAGGATGACGCTGTGGAGGAAGGGTATGTCTGTTTGACGTTGATCGGAGTGTTGGTTTGTGGGTTTGTAACGGATTTGATCGGAATTCATTCGATTTTTGGGGGTTTTGTGTTTGGATTGACGGTAGCGAAGGAGGGGAGATTCGCGGAGAGATTGATTGAGAGGATTGAGGATTTCGTGTCGGGGCTTCTTCTTCCCCTGTATTTTGCGTCGAGTGGGTTGAAGACGAATGTGACGAAGATCAACGGCGGAAAATCATGGGGGCTGCTGGCGCTGGTTATTTCCACGGCGTGTGCAGGGAAGATTCTGGCGACGTTTGCGGCGGCGATGGCGTTTTTAATGCCGGCGAGGGAGGCGATGGCTTTGGGATTGCTTATGAACACTAAAGGCTTGGTGGAACTCATCGTGCTCAATATTGGGAAGGAGAAAAAGGTTTTGAACGACGAAGTATTCGCGATACTAGTGTTAATGGCACTATTCACAACCTTCATCACCACCCCCACCGTGATGGCAGTCTACAAGCCAGCCCGCGCGGCGGCCGCCACCCGAACCCAGCGCAAACTCCGCCACCTCTCTGGCGCCGGGAACTCCACCAACGACAAGTCACTAACAATCCTAGCCTGCCTCCACAGCTTAGGCAACGTACCTGCCCTAATCAGCCTGACCGAGTCAACTCGCAGCACCAAAACCTCGTCCCTCAAACTCTTCGTCATGCACCTCGTCGAACTCACCGAGCGCTCCTCCTCAATCCTAATGGCCCAACGCGCCCGCAAGAACGGCTTCCCTTTCTTCGCAAGGTTCCGCAAGGCCAGCGAGTGGCACGACCAGATGGCCGCCGCCTTTCAGGCCTACAGCCAGCTGGGCCGGGTCAAGGTCCGGCCCACCACAGCGGTCTCTTCCTTAACCACAATGCACGAGGACATCTGCGGCGTGGCGGACGATAAGAGAGTGGCGATGATCATCTTGCCGTTTCATCGGAATTGGAGGACGGTCAGCGGCGTGGAGGAGAATATGGGCCATGGGTGGAGAGTTGTGAACCAGCGGGTGCTGAAGAGTGCGCCTTGCTCGGTGGCGGTTCTTGTGGACCGGGGGTTAGGAGCGGTGGTTGGTGCGGCACAGAGCATTTGTGTGATGTTTTTTGGTGGTCCTGATGACCGGGAGGCGCTGGAATTGGGTGGACGGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTGAGGTTTCGGGCGTCGCCGCCGTCGGATGTAGTGGAGGGTAGTAAGGTCATTTCGCGACATATGTATTCTAAATCTAGCGACAGTCATTATAGCTTCTCCACTGCTCCAATAAACTGGGAAAAAGAAAAGGAGCTAGATGAAGCAGCAATAGCAGAATTCAGAGCCAAATGGGATGCAACAGCTGAGTACACAGAAAAGGAAGCCACCACCGACACGAACACGATAGTTGAAGGGGTGGTCGGGATCGGAAAGGAAGGCGGTTTTGACCTAATCGTGGTCGGGAAGGGTCGGGTTCCGTCGAGCATGGTGGCAAAACTAGCAGACCGGGCGGCGGAGCACTCAGAGTTAGGGCCGATCGGGGACATATTGAGCAGCTCCGGCAGGGGAATAGTATCTTCAATTCTAGTAATTCAACAACACGAAGAAGAAGAAATTCCAGCATTGAATAAGCAGTCTTTCTCAATCATAGGAGCTTCCATTAATGTATAA 2484 53.74 MSVNITSIKTASNGVWQGDNPLNFAFPLLILQSVLILLLTRLLAAVLKPLRQPKVIAEILGGILLGPSVFGRNQVYLNWVFPDWSTPILESVASIGLLFFLFLVGLELDLSSVRRSGRRAFGIAVAGISVPFLSGTGIAFVLRKTVAGANNVGYWQFVVFIGVALSITAFPVLTRILAELKLLTTEVGEIAMAAAAFNDMAAWILLALAIALTGNDNSVTVQRSSLVSVWVLLSGAGFVVFMMTVVRPGMKWVARRCSYEDDAVEEGYVCLTLIGVLVCGFVTDLIGIHSIFGGFVFGLTVAKEGRFAERLIERIEDFVSGLLLPLYFASSGLKTNVTKINGGKSWGLLALVISTACAGKILATFAAAMAFLMPAREAMALGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARAAAATRTQRKLRHLSGAGNSTNDKSLTILACLHSLGNVPALISLTESTRSTKTSSLKLFVMHLVELTERSSSILMAQRARKNGFPFFARFRKASEWHDQMAAAFQAYSQLGRVKVRPTTAVSSLTTMHEDICGVADDKRVAMIILPFHRNWRTVSGVEENMGHGWRVVNQRVLKSAPCSVAVLVDRGLGAVVGAAQSICVMFFGGPDDREALELGGRMAEHPAVKVTVVRFRASPPSDVVEGSKVISRHMYSKSSDSHYSFSTAPINWEKEKELDEAAIAEFRAKWDATAEYTEKEATTDTNTIVEGVVGIGKEGGFDLIVVGKGRVPSSMVAKLADRAAEHSELGPIGDILSSSGRGIVSSILVIQQHEEEEIPALNKQSFSIIGASINV 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5432841 5436830 - Carg24361-RA Car07g00960 152194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00960 827 Pfam Sodium/hydrogen exchanger family 35 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00960 Car-Chr7:5432841 Car16g00507 Car-Chr16:3242592 0 dispersed
Car03g00383 Car-Chr3:4611028 Car07g00960 Car-Chr7:5432841 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00960 - - csv:101207589 1180.24