Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01025 ATGGTTGTTTGCCCACCCACGCCTGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGTGAAGCAGTTCCGGATGACGACGATGATGGGGGTTCTGCAGCTCCTTTGAATGAAAATCATGATGATGGTACTCAAATGATGACAAATGATGATATATTGGGAGATGAGATACCTGAGGACCAGGAACGTGCTTTAAAACACTTTTGCTATCAGATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCACATCCAGTGTCTCTTAACAGAGACAATCTGCAACTGCTAAGGCAACGCTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTCATAACCGTGGATGGATGCTACTTGATAGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTTCCTTGCAGAAATGCGAATGATGGACTAGTTGAAAAAAGTCACCACTTTACACTACTTGATGGAGAAATGATAATCGATACTGTGCCAGACTCGCAGAAGCAGGAGAGAAGATACCTTATCTATGATATGATGGCAATTAATCATGTTTCAGTTATTGAGCGTCCTTTCTATGAACGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAATTATGAGCGCCAGAATATTTACCAAAGCAGAAACCTTCATTACAGATATGACCTAGAGCCATTTAGGGTGAGGAGGAAAGACTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTGAAGTGGAAATATCCTGAAATGAACTCAGTCGACTTCCTATTTGAGTTGGGTGAAGATGATTCTCAGATTCTTATTTTGTTCGAACGTGGAAAGAGGAAAACGATGGATGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTCGAGTGTTCTTGGGATTCCGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTACAAAAAGGTCATGCGCAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCACGAGATAATACGCTTGCCCATGTATGCTGATAGGATAAGGAATGATAGTAAAGCGGCTCAACATACGAATTCAACACGACGGAGGTGA 1254 41.47 MVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDGTQMMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRGFKFRRVQMRFPCRNANDGLVEKSHHFTLLDGEMIIDTVPDSQKQERRYLIYDMMAINHVSVIERPFYERWKMLEKEVIEPRNYERQNIYQSRNLHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFELGEDDSQILILFERGKRKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5915311 5925125 + Carg13263-RA Car07g01025 152259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01025 417 MobiDBLite consensus disorder prediction 1 51 - -
Car07g01025 417 ProSiteProfiles ATP-dependent DNA ligase family profile. 171 316 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Car07g01025 417 Pfam mRNA capping enzyme, C-terminal domain 291 385 IPR013846 -
Car07g01025 417 Pfam mRNA capping enzyme, catalytic domain 89 287 IPR001339 GO:0004484|GO:0005524|GO:0006370
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00328 Car07g01025 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00328 Car-Chr3:4276111 Car07g01025 Car-Chr7:5915311 0 transposed
Car03g00327 Car-Chr3:4274874 Car07g01025 Car-Chr7:5915311 8.19E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01025 K13917 - csv:101209960 795.423