Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01042 ATGGCTTCCCAAACAGAGGCTTGGCTACTGGAGAACGGCAGCGTTAAGTGCTTAACCAAAGAGAACCGACAAGGCCATGGCCGAAGCCTTCGGACAGCTCACAACATGTCGTCCTCTTCCCTCCGCATAAAGTCCGATTTGACCCTCGTCTCCAAAGTCCAATTCCCCTGCCTTAGGAACTTCCTCGCTCATCTTCAGGAGGTCCTTTTGGGAACTAAGCTTTCCGTTCTCTTCCCTGCCATTCCGCTAGCCGTTCTGGCTCAGAGTTATGCCTTTGGAAGACCTTGGATTTTTGCTTTGAGTTTGCTTGGCCTCACGCCATTGGCTGAACGTGTCAGCTTTCTGACAGAGCAAATCGCTTATTTCACTGGTCCAACAGTTGGAGGGCTTTTGAATGCAACGTGTGGGAATGCAACAGAGATGATAATAGCAATTCTTGCACTTACAAAGGGAAAGATAGAAGTGGTGAAGTATTCTCTCTTGGGCTCTGTTCTTTCAAACCTTCTTCTTGTTCTTGGCACCTCTCTCTTCTCTGCTGGCATTGCCAATCTATCAACCCAACAAATTTTTGATAGAAGACAGGCAGATGTGAACTCACTGATGCTGATGCTGTCATTTCTGTGCCATCTATTGCCGTTATTATTTGGGTACGCCGCCGCCACCACCTCCGCCGTCGCAGCTGCCGCCTCCACCCTCCACCTGTCCAGGGCCAGCAGCATCGTTATGCTCTTAGCTTACATTGCTTACTTGGTCTTCCAACTCTGGACTCACCGCCAATTATTTGAAGCCCAGGAGGATGAAAACGACGACGTACCAGGAGAAGAGGCAGTTATTGGATTCTGGAGTGCATTTGCATGGCTCGTTGGAATGACACTGCTGATTGCTTTGCTGTCGGAATACGTTGTCAACACAATTGAGGAAGCGTCAACTACTTGGAATTTGTCGGTGTGTTTCCTCAGCATAATCTTACTCCCTATCGTTGGGAATGCAGCCGAACATGCCGGAGCTATCATCTTTGCCTTAAAAAATAAGTTGGACATAAGTTTGGGGGTTGCTTTGGGGTCAGCAACACAAATTGCACTTTTTGTGATTCCACTGTGTGTGATCGTTGCTTGGACAATGGGAGTGGATATGGATCTAAATTTCAACCTCATGGAAACGGCGTCGCTTGGATTAGCCATTATTACCACAGCCTTCGCCTTACAAGATGGAACCTCTCACTATATTAAAGGCCTTGTTCTTCTGTTATGTTATGTTATTATTGCGGCTTGTTTCTTTGTCTCCAACACTCAACAAGATGATAACAATATCCTCAATTTGGGAATCCAATCTAGAAGAATTCTCTTGAAGTCTCCTTGA 1359 46.65 MASQTEAWLLENGSVKCLTKENRQGHGRSLRTAHNMSSSSLRIKSDLTLVSKVQFPCLRNFLAHLQEVLLGTKLSVLFPAIPLAVLAQSYAFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALTKGKIEVVKYSLLGSVLSNLLLVLGTSLFSAGIANLSTQQIFDRRQADVNSLMLMLSFLCHLLPLLFGYAAATTSAVAAAASTLHLSRASSIVMLLAYIAYLVFQLWTHRQLFEAQEDENDDVPGEEAVIGFWSAFAWLVGMTLLIALLSEYVVNTIEEASTTWNLSVCFLSIILLPIVGNAAEHAGAIIFALKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETASLGLAIITTAFALQDGTSHYIKGLVLLLCYVIIAACFFVSNTQQDDNNILNLGIQSRRILLKSP 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6032943 6036376 - Carg13280-RA Car07g01042 152276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01042 452 Pfam Sodium/calcium exchanger protein 96 255 IPR004837 GO:0016021|GO:0055085
Car07g01042 452 Pfam Sodium/calcium exchanger protein 283 424 IPR004837 GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00308 Car07g01042 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00604 Car-Chr1:3537468 Car07g01042 Car-Chr7:6032943 3.16E-109 dispersed
Car07g01042 Car-Chr7:6032943 Car20g00598 Car-Chr20:3361033 3.00E-91 dispersed
Car03g00308 Car-Chr3:4150213 Car07g01042 Car-Chr7:6032943 1.40E-96 wgd
Car06g00205 Car-Chr6:1201779 Car07g01042 Car-Chr7:6032943 0 wgd
Car06g00205 Car-Chr6:1201779 Car07g01042 Car-Chr7:6032943 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01042 K07300 - csv:101213857 701.434