Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01115 ATGGCGACCAATTTCTGGTCGTTAGCATGCACTCGGTTTCAGAACAATAGTAATCTGTTGCCGCGGCCTCATTATCCGTCCATGCCCAAATATCCGGCGGGGATTTCGCTACCGGAGAGTAGGTTGCCGACGAATGAGTCGACGGCGTTCTTCTCCGTCAATGGAATGACCTGCTCTGCTTGTGCTGGCTCCGTCGAGAAGGCGATCAAACGGCTCCCTGGGATTCGTGAAGCCGTCGTTGATGTTTTGAATGCTAAAGCTCGAGTCCAGTTTTACCCTAGCTTCGTTAATTTGGATCAAATATGTGAGGCAATTAACGATGTAGGCTTTGAAGCAAGTATAGTCGATGACGAAATGATTGAAAGATGTCGAATTCATATAATTGGAATGACTTGCACTTCTTGCTCCAAAACTTTGGAATCTACAATACAAGCAATTCGTGGAGTTCAAAACGCCCAAGTTGCATTAGCCACGGAAGAAGCAGAAGTTTGTTTCGATCCAAGAATTTTGAACTACAATCAACTTCTCCAAGCCATTGAAGAATCTGGATTCGAAGCTTTACTTATTAGCACAGAAGAAGATGTAAGCAAGATACAGCTCCAAGTTGATGGAGTGAGATCTGAGAAATCAATGAGAGTGATTGGGAGCTCTCTGGAAGCACTTCCTGGAGTTCTAGGTATTAATATTGACCCTGCACTCAGCAAACTTTCATTGTCTTACAAGCCAAATGTCACCGGACCTCGGAATATAATCCAAGTGATTGAATCAACTGGATCTGGTCGTTTTAAGGCAACGATATTCCCTGAAGAACAGGGCAGAGAAGCCTATAAAAAGGAGGAAATTAAGCAATATTACCGATCATTCTTATGGAGTATGATATTCACAATTCCAGTGTTTTTAAGCTCTATGGTCTTCACTTATATACCTGGTATTAAGGATGTGCTAGATGCCAAAATTGTCAATATGATGACTGTTGGGGAGCTGCTGAGGTGGGTGTTATCATCTCCCGTACAGTTCATTATTGGAAGGCGGTTCTATACAGGGTCTTACAAAGCATTGCGTCATGGTTCTGCTAATATGGATGTTTTGATTGGTTTGGGGACTAATGCAGCATACTTTTATTCAGTCTACATGGTATTAAGATCTGCAACCTCAAGTGATTTTAAGGCCACAGACTTCTTTGAGACCAGTTCAATGCTTATATCATTCATCCTTCTCGGGAAATATCTTGAGGTCTTGGCTAAGGGAAAAACATCAGAGGCTATTGTGAAGCTTATGAAGTTGGTGCCTGAAACAGCAACCTTGCTTACTTTTGATAATGATGGAAACGTCATTAGGGAAGAAGAAATTGATAGTCGGTTGATACAAAAGAATGATGTAATTAAAGTCATTCCAGGGTCAAAGGTTGCTTCCGATGGAGTTGTTGTTTGGGGACAAAGTCATGTCAATGAAAGCATGATTACTGGGGAAGCCAAGCCAGTGGCAAAGAGAACGGATGATACGGTGATTGGAGGCACCTTGAATGAGAATGGTGTACTACATGTGAGGGCAACACACGTTGGATCTGAAAGCGCCCTTTCACAGATCGTGCGACTTGTTGAATCGGCTCAAATGGCCAAAGCTCCAGTTCAGAAAATTGCAGATCGCATCTCTAAGTTTTTTGTGCCAATGGTTATAGTCCTTTCATTGACAACATGGCTCGTCTGGTTTCTTACTGGGAAGTATGGTGGCTACCCAAAGTCCTGGATACCTTCTTCCATGGATAGCTTTGAGCTTGCTCTCCAGTTTGGCATTTCAGTTATGGTCATAGCATGCCCTTGTGCTTTGGGCCTGGCAACTCCAACTGCAGTCATGGTTGCAACAGGAGTTGGAGCCTCAAAAGGTGTTTTAATTAAAGGTGGCCAAGCATTAGAGAGTGCTCACAAGGTGAATTGTATTGTGTTCGACAAAACTGGAACTCTTACAGTCGGGAAGCCAGTTGTGGTGAAAACAAAGCTACTAAAAAATATGGTTCTGAAAGAATTCTATGAACTAGTTGCCGCAACTGAGGTCGACTTGGTAAACAGCGAGCATCCATTGGCCAAAGCCATTGTTGAATATGCTAAAAAGTTCAAAGAAGAGGACAATAACCAAACATGGCCTGAAGCACTAGATTTTATTTCCATTACTGGACATGGAGTAAAGGCCATCGTTCAAAACAAAGAAGTAGTTGCAGGCAACAAGAGTCTTATGTTAGATCAGAACATTTTCATACCCGTTGAAGCTGAAGAAATATTAAAAGAAATCGAAGAAATGGCTCAAACTGGAATTTTGGTATCCATTGATCGGAAATTGACCGGGGTTCTTGCCATATCCGATGCACTGAAACCAAGTGCTCGCGATGTCATTTCCATACTCGAAGCCATGAAAGTTAAATCCATCATGGTGACAGGTGATAATTGGGGGACAGCCAAGTCCATAGCCAAGGAGGTTGGGATTGATGACATAATTGCAGTAGCTAAACCCGACATGAAAGCTGAGGAAGTGAAGAGACTACAGTCTTTGGGTCATACGGTGGCAATGGTAGGAGACGGGATCAACGACTCGCCAGCGCTTGTGGCTGCAGATGTCGGAATGGCCATTGGTGCAGGCACAGACATTGCAATTGAGGCAGCTGACATAGTCTTGATGAAAAGCAACTTGGAGGATGTCATAACCGCCATCGACCTTTCAAGAAAAACATTCTCCAGGATCCGTCTGAACTACATTTGGGCACTTGGTTACAATCTCCTCAGCATCCCTATCGCAGCCGGAGTCCTTTTCCCATCGACTCGGTTTCGGCTACCACCATGGATTGCAGGAGCAGCAATGGCAGCCTCTTCTGTTAGTGTTGTTTGTAGTTCTCTCCAGCTCAAGTATTACAAAAGGCCCAAGAAGCTTGATACCCTTGAGATACAAGGCATTAGAGTTGTGTGA 2955 43.62 MATNFWSLACTRFQNNSNLLPRPHYPSMPKYPAGISLPESRLPTNESTAFFSVNGMTCSACAGSVEKAIKRLPGIREAVVDVLNAKARVQFYPSFVNLDQICEAINDVGFEASIVDDEMIERCRIHIIGMTCTSCSKTLESTIQAIRGVQNAQVALATEEAEVCFDPRILNYNQLLQAIEESGFEALLISTEEDVSKIQLQVDGVRSEKSMRVIGSSLEALPGVLGINIDPALSKLSLSYKPNVTGPRNIIQVIESTGSGRFKATIFPEEQGREAYKKEEIKQYYRSFLWSMIFTIPVFLSSMVFTYIPGIKDVLDAKIVNMMTVGELLRWVLSSPVQFIIGRRFYTGSYKALRHGSANMDVLIGLGTNAAYFYSVYMVLRSATSSDFKATDFFETSSMLISFILLGKYLEVLAKGKTSEAIVKLMKLVPETATLLTFDNDGNVIREEEIDSRLIQKNDVIKVIPGSKVASDGVVVWGQSHVNESMITGEAKPVAKRTDDTVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVIVLSLTTWLVWFLTGKYGGYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVATGVGASKGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVKTKLLKNMVLKEFYELVAATEVDLVNSEHPLAKAIVEYAKKFKEEDNNQTWPEALDFISITGHGVKAIVQNKEVVAGNKSLMLDQNIFIPVEAEEILKEIEEMAQTGILVSIDRKLTGVLAISDALKPSARDVISILEAMKVKSIMVTGDNWGTAKSIAKEVGIDDIIAVAKPDMKAEEVKRLQSLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLSIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLQLKYYKRPKKLDTLEIQGIRVV 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6658148 6664097 - Carg13354-RA Car07g01115 152349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01115 984 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872
Car07g01115 984 Pfam Heavy-metal-associated domain 51 110 IPR006121 GO:0046872
Car07g01115 984 ProSiteProfiles Heavy-metal-associated domain profile. 122 188 IPR006121 GO:0046872
Car07g01115 984 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
Car07g01115 984 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872
Car07g01115 984 ProSiteProfiles Heavy-metal-associated domain profile. 197 258 IPR006121 GO:0046872
Car07g01115 984 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Car07g01115 984 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Car07g01115 984 Pfam E1-E2 ATPase 428 626 - -
Car07g01115 984 Pfam haloacid dehalogenase-like hydrolase 643 869 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01346 Car-Chr3:10173427 Car07g01115 Car-Chr7:6658148 2.29E-14 dispersed
Car07g00031 Car-Chr7:194862 Car07g01115 Car-Chr7:6658148 1.29E-16 dispersed
Car07g01115 Car-Chr7:6658148 Car15g00097 Car-Chr15:568053 0 dispersed
Car02g01227 Car-Chr2:8306662 Car07g01115 Car-Chr7:6658148 0 transposed
Car03g00188 Car-Chr3:3161854 Car07g01115 Car-Chr7:6658148 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01115 K17686 - csv:101218801 1731.46