Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01142 ATGCATAAGCGTCCCGGTAAGCAACAGTCGGAATCACTGTCGAATAGGATCTACGAATACAGAGGGGTGTTATTGTTCACGTCTCTTTCGCTTTTCCTAATCGCCTTTGTTCTCTATTTCATGCCGGGCCGTGAAAATTACTCGTTCAACCACCGCAAGGTTTACCCTGATCACAGGTCGTCTTCTTCTTCTTCTAAATCCACTTATGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCAAAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTTGAACAACTTAATCCAGGATTGAGTGCATATGCTGACAACCCCAAGAATGCTGCAGCTTCTCTAATTTCCCTTTTGGAAAAAGCGGAAAATGTGGTTCCTAAAGGGCTGCGGTCAATGGCCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCTTTGAAGGGGGATACATCTGACAAAATTTTGCAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGACCTCAAGTTGGAGGACAATGCTGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACATTAAACTATCTGCTAGGGAACTTGGGCAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGAGGAGGATCTATTCAAATGGCATATGCTATCTCCGAAACGGATGCTGCTCGATTATCAGAAGCAGAGAGCGTATACATAAAAAAAATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGATTACTAGCTGCTCGAGCCGAGGTTTTGAGTGTCTCTAAAAATTCTAGCAACGATTGCATCCTATCTGGATTCGAAGGAGCATACCAATACGGGGGAAAGGACTATAAAGCATCAGCCTCTTCATCAGGCTCCAGCTTTAATGGATGCAAGAGGACAGTCGTGGAGGCTCTCAAGGTTAATGAATCAATGTGTACTCACGAGCAGTGCACTTTCGGTGGAGTTTGGAACGGCGGAGGAGGCGACGGGCAGAAGAATCTCTACGTTGCTTCATTTTTCTTCGACAGGGCTGCTGAGGCTGGTTTTGCTGACCCCAACAAGCCATTTGCTGAAGTTCATCCTGTAGACTTCCGTGATGCAGCGAGGCAGGCATGCCAAATCAAACTCGAGGATGCTGCTACATATCCCAAGGTCAAGAAGGATAACCTTCCGTACTTGTGTATGGATCTTGTGTATCAATACGCACTACTTATAGATGGATTAGGCCTAGATCCTTGGCAAAAGATCACATTGGTGAAGAAGGTTAAATACCACAACTCCTTGGTTGAAGCAGCCTGGCCTCTAGGCAGCGCCATTGAAGCTGTATCGTCGTTAGCCTAA 1404 45.58 MHKRPGKQQSESLSNRIYEYRGVLLFTSLSLFLIAFVLYFMPGRENYSFNHRKVYPDHRSSSSSSKSTYAVIFDAGSSGSRVHVFCFDQNLDLLPVGKDIELFEQLNPGLSAYADNPKNAAASLISLLEKAENVVPKGLRSMAPVRVGATAGLRALKGDTSDKILQAVRDLLRDKSDLKLEDNAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSIQMAYAISETDAARLSEAESVYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSKNSSNDCILSGFEGAYQYGGKDYKASASSSGSSFNGCKRTVVEALKVNESMCTHEQCTFGGVWNGGGGDGQKNLYVASFFFDRAAEAGFADPNKPFAEVHPVDFRDAARQACQIKLEDAATYPKVKKDNLPYLCMDLVYQYALLIDGLGLDPWQKITLVKKVKYHNSLVEAAWPLGSAIEAVSSLA 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6862618 6867932 + Carg12616-RA Car07g01142 152376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01142 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 465 IPR000407 GO:0016787
Car07g01142 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00432 Car-Chr1:2475806 Car07g01142 Car-Chr7:6862618 1.21E-37 dispersed
Car07g01142 Car-Chr7:6862618 Car13g00717 Car-Chr13:8363754 5.25E-20 dispersed
Car09g00963 Car-Chr9:6006495 Car07g01142 Car-Chr7:6862618 3.84E-171 transposed
Car03g00214 Car-Chr3:3448514 Car07g01142 Car-Chr7:6862618 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01142 K14641 - csv:101220305 780.4