Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01146 ATGGCGACTTACGCTTTGCTTGGCGACTCCACTGTCCGCGTTAATGGCGGTTTCGATGACGGTTCTCTGACCAGCAACTCGACGAACAGCAACGGCAGCGAAGAACTTAATCAACAGATTGTTCAAGTTCCGGTTCAGGTTTCTCAACCGCCGCCGCGATTACCGCCTGGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATAGAGATCGAAGAACTCGACGGCGGAGGCGGGGGTACCGCCGCCGTTCATCCACGGTTTTGCCGGCGGAGTTTGGCTTCCGATCGTCCTTTTGCAGGTGGAGAAAATAAGACGAATGAGAATGTGGATAACTATTGTTCTTCTTCAAACCCTAGCCATGGCGCTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGTTGTGGTCGCAGGGTCAAATTTATCAAATCCTCCGTCTGGTTCTGATGCTACGGCTTCTTCCACTACCTCCAACGTCTCGTCTCTTATTGATAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCGCCATTTGCAGAATCCTGCAGTCTGTGGGTTTTCTGGTTTACCCTTGTTCCCACCCGAATCGAATCACCACCACCACCACAACAAGTTAAATACTCGCAATAATCCTTTTCCCATTCCTAATCCATGTCAGGTTGTTCTTCATAATCCTCCAACTTCTACAACGACCTCCATTATCGCCGCCGCTTCTACTCCGATGGATGATTCCTCCGCCACTGCTTGGATCGACGGTATTATCAAGGACTTAATCCACAGCTCCACTGCCGTATCCATTCCTCAGCTTATTCAGAACGTTCGTGATATTATCTACCCTTGTAACCCCAATCTTGCGAACCTCCTTGAGTTTCGTCTTCGTACTTTGACAGAACCTAACGTTCCTAACTTCGCCGCTGAGGATCAGCGTGTTAGGAAATCGCCCTTGCCGTCACCAGCGCCGGTGGGAGGCTTGGGGCTGCAGCAGAGGCAGTTCAATCAGGAACATGAGCAAGAACAGGATTGTTCTGGGTTGAAGCTTAATCTCGAGTCTTCTTTGCATAATCTTCCTAATTTCTCCTCTCAGCCTCCGTTTCATGACCCATATCTCCACTGGGGAGCCACTCCTACCCCAGCCCCCACTCCCTCCGTCGCCACCACCGGCGGCGAGGTTCCCGGTCATCAACTTAATCTCTCTTCTGTTCCACATTCATCACTTATTCCTCTAAACCATATCCCTTCTAAGCCACAGCCAGAACAGCAAAACTCTTGTCCGGTCAATGTGAAGGCAGCGGCGGCGGCGGCCGCACAGCCATCTCCCTCGCCGCCGACGAGTAATGATCCTTCAACGACTGCGTTACTGATTAGAGAAATAAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACATCTCTTGACTTTGCTTCTTCAATGTGCAGAAGCCGTTTCTGCCGATAATTTAGAAGAAGCCAATAAGATGCTACTGGAAATCTCGGAGTTGTCGACGCCCTTCGGTACATCGGCGCAAAGAGTGGCGGCGTATTTCTCAGAAGCAATGTCGGCGAGGCTTGTGAGTTCATGTTTAGGCATATACGCCGCTTTGCCGCCGACGTTATTGCCCCATACACACAGCCAGAAGATAGCCTCAGCCTTTCAAGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACAGCCAATCAAGCCATTCAAGAAGCCTTCGAAAGGGAAGAGAGAGTTCACATCATAGATCTAGACATCATGCAAGGCCTTCAATGGCCAGGCCTCTTCCACATCTTGGCGTCTCGGCCGGGTGGGCCGCCCTATGTCCGCCTCACTGGGCTGGGGACCTCTCAGGAAGTTCTTGAGGCCACTGGCAAACGTCTCACTGAATTCGCCGAGAAGCTTGGCCTTCCGTTTGATTTCTTTCCTGTTGCAGATAAAATAGGCAATCTGGACTTGGAGAGGCTCAACGTGAGCCAGAGGGAAGCCGTTGCCGTCCATTGGATGCAGCATTCTCTTTACGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTCTGCAGAGATTGGCTCCAAAAGTGGTGACGGTGGTCGAACAAGATCTGAGCCACACAGGCTCCTTCTTGGGAAGATTCGTAGAGGCCATTCATTACTATTCAGCACTGTTTGACTCTTTGGGTGTCAGCTATGGCGAAGAGAGTGAAGAGAGGCACTTAGTGGAGCAGCTACTGTTATCAAGGGAGATCAGAAACGTGCTGGCCGTCGGAGGACCGTCGAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAGCTGCAACAATCTGGGTTTAAGGGCATTTCTCTCGCCGGTAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTATACGCTTGTGGAAGACAATGGGACTTTGAAACTTGGGTGGAAGGATCTATGCTTGCTGACAGCGTCGGCTTGGAAGCCGCCGTTTCATCACCATGCTGCCGGCAACCACATTCCCAGGTACTGA 2556 51.02 MATYALLGDSTVRVNGGFDDGSLTSNSTNSNGSEELNQQIVQVPVQVSQPPPRLPPGKMVRKRIASEIEIEELDGGGGGTAAVHPRFCRRSLASDRPFAGGENKTNENVDNYCSSSNPSHGANHSTVHNLTALTSVVVAGSNLSNPPSGSDATASSTTSNVSSLIDSTLPVLRPQPHHRHLQNPAVCGFSGLPLFPPESNHHHHHNKLNTRNNPFPIPNPCQVVLHNPPTSTTTSIIAAASTPMDDSSATAWIDGIIKDLIHSSTAVSIPQLIQNVRDIIYPCNPNLANLLEFRLRTLTEPNVPNFAAEDQRVRKSPLPSPAPVGGLGLQQRQFNQEHEQEQDCSGLKLNLESSLHNLPNFSSQPPFHDPYLHWGATPTPAPTPSVATTGGEVPGHQLNLSSVPHSSLIPLNHIPSKPQPEQQNSCPVNVKAAAAAAAQPSPSPPTSNDPSTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPTLLPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSQREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQLLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHHAAGNHIPRY 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6895184 6898589 - Carg12620-RA Car07g01146 152380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01146 851 Pfam GRAS domain family 477 836 IPR005202 -
Car07g01146 851 MobiDBLite consensus disorder prediction 308 328 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 415 451 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 104 125 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 415 429 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 381 396 - -
Car07g01146 851 ProSiteProfiles GRAS family profile. 467 836 IPR005202 -
Car07g01146 851 MobiDBLite consensus disorder prediction 142 161 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 369 396 - -
Car07g01146 851 MobiDBLite consensus disorder prediction 96 125 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00224 Car07g01146 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01146 Car-Chr7:6895184 Car10g00825 Car-Chr10:4678782 2.91E-72 dispersed
Car04g00576 Car-Chr4:3285365 Car07g01146 Car-Chr7:6895184 8.82E-161 transposed
Car08g00236 Car-Chr8:1494111 Car07g01146 Car-Chr7:6895184 1.40E-107 transposed
Car03g00224 Car-Chr3:3531067 Car07g01146 Car-Chr7:6895184 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3906 PF03514 GRAS 1.60E-126 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01146 - - bhj:120074183 1382.08