Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g01149 | ATGGAGAAGTACGAGAAGCTCGAAAAGGTCGGAGAAGGAACTTACGGGAAGGTGTACAAGGCTAAAGATAAGGAAACTGGCCAACTTGTTGCTCTGAAGAAAACTCGCCTTGAAATGGACGAAGAAGGAGTTCCACCGACGGCGCTTCGTGAGGTTTCTCTTCTCCAATTGCTCTCTCAGTCTCTCTATGTTGTTCGTCTTCTCTGCGTTGAGCATGTTCACCACCATAAAAGTGGTAAGCCTCTTCTCTACCTTGTATTTGAGTATCTGGATACTGATCTCAAGAAGTACATCGATTCGCATCGCAAGGGACCCAACCCTAGGCCTCTTCCTTCTTCCCTTGTTCAGAGTTTCTTGTTTCAACTCTGTAAGGGTGTTGCGCATTGTCATAGTCATGGCGTTCTCCATCGTGACCTGAAACCGCAGAATCTTCTTCTGGATCAGGGTAAGGGTATTCTGAAGATTGCCGATCTTGGCCTTGGCCGTGCTTTTACTGTCCCTCTTAAGAGCTACACTCATGAGATTGTTACTCTCTGGTACCGTGCTCCTGAGGTTCTCCTTGGATCCACTCATTACTCCACTGCTGTCGATATGTGGTCTGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAGGCCCTGTTCCCCGGAGATTCTGAGTTTCAGCAGTTGCTCCACATTTTTAGGCTTCTAGGTACCCCCACCGAGAAACAGTGGCCTGGAGTTAGTTCTTTGCGGGACTGGCATGTCTATCCTCAATGGGAACCTCAGAATCTGACACGTGCAGTTCCATCCCTGGAACCCGAGGGTGCTGACCTTCTCTCGAAAATGCTTACATATAATCCGGCAGATAGAATCTCAGCGAAGGCAGCTCTAGAGCATCCGTACTTTGACAGCCTCGACAAGTCTCAGTATTAG | 918 | 48.47 | MEKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKYIDSHRKGPNPRPLPSSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQGKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGADLLSKMLTYNPADRISAKAALEHPYFDSLDKSQY | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6937306 | 6940839 | + | Carg12623-RA | Car07g01149 | 152383 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g01149 | 305 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 300 | IPR011009 | - | |
Car07g01149 | 305 | SMART | serkin_6 | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car07g01149 | 305 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 305 | - | - | |
Car07g01149 | 305 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 91 | - | - | |
Car07g01149 | 305 | Pfam | Protein kinase domain | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car07g01149 | 305 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 134 | 146 | IPR008271 | GO:0004672|GO:0006468 | |
Car07g01149 | 305 | ProSiteProfiles | Protein kinase domain profile. | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car07g01149 | 305 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 305 | - | - | |
Car07g01149 | 305 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Car07g01149 | 305 | PANTHER | CYCLIN-DEPENDENT KINASE B1-2 | 1 | 305 | - | - | |
Car07g01149 | 305 | Coils | Coil | 305 | 305 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01609 | Car-Chr1:13219060 | Car07g01149 | Car-Chr7:6937306 | 1.60E-142 | dispersed | |
Car04g01963 | Car-Chr4:13612643 | Car07g01149 | Car-Chr7:6937306 | 3.09E-14 | dispersed | |
Car07g01149 | Car-Chr7:6937306 | Car18g00857 | Car-Chr18:9596081 | 2.61E-122 | dispersed | |
Car07g01149 | Car-Chr7:6937306 | Car04g01486 | Car-Chr4:8651086 | 1.02E-110 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89009 | PF00069 | Pkinase | 1.60E-66 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g01149 | K07760 | - | csv:101204557 | 601.282 |