Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01149 ATGGAGAAGTACGAGAAGCTCGAAAAGGTCGGAGAAGGAACTTACGGGAAGGTGTACAAGGCTAAAGATAAGGAAACTGGCCAACTTGTTGCTCTGAAGAAAACTCGCCTTGAAATGGACGAAGAAGGAGTTCCACCGACGGCGCTTCGTGAGGTTTCTCTTCTCCAATTGCTCTCTCAGTCTCTCTATGTTGTTCGTCTTCTCTGCGTTGAGCATGTTCACCACCATAAAAGTGGTAAGCCTCTTCTCTACCTTGTATTTGAGTATCTGGATACTGATCTCAAGAAGTACATCGATTCGCATCGCAAGGGACCCAACCCTAGGCCTCTTCCTTCTTCCCTTGTTCAGAGTTTCTTGTTTCAACTCTGTAAGGGTGTTGCGCATTGTCATAGTCATGGCGTTCTCCATCGTGACCTGAAACCGCAGAATCTTCTTCTGGATCAGGGTAAGGGTATTCTGAAGATTGCCGATCTTGGCCTTGGCCGTGCTTTTACTGTCCCTCTTAAGAGCTACACTCATGAGATTGTTACTCTCTGGTACCGTGCTCCTGAGGTTCTCCTTGGATCCACTCATTACTCCACTGCTGTCGATATGTGGTCTGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAGGCCCTGTTCCCCGGAGATTCTGAGTTTCAGCAGTTGCTCCACATTTTTAGGCTTCTAGGTACCCCCACCGAGAAACAGTGGCCTGGAGTTAGTTCTTTGCGGGACTGGCATGTCTATCCTCAATGGGAACCTCAGAATCTGACACGTGCAGTTCCATCCCTGGAACCCGAGGGTGCTGACCTTCTCTCGAAAATGCTTACATATAATCCGGCAGATAGAATCTCAGCGAAGGCAGCTCTAGAGCATCCGTACTTTGACAGCCTCGACAAGTCTCAGTATTAG 918 48.47 MEKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKYIDSHRKGPNPRPLPSSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQGKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGADLLSKMLTYNPADRISAKAALEHPYFDSLDKSQY 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6937306 6940839 + Carg12623-RA Car07g01149 152383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01149 305 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Car07g01149 305 SMART serkin_6 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01149 305 Gene3D Transferase(Phosphotransferase) domain 1 92 305 - -
Car07g01149 305 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Car07g01149 305 Pfam Protein kinase domain 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01149 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Car07g01149 305 ProSiteProfiles Protein kinase domain profile. 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01149 305 PANTHER CELL DIVISION PROTEIN KINASE 1 305 - -
Car07g01149 305 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Car07g01149 305 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 305 - -
Car07g01149 305 Coils Coil 305 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01609 Car-Chr1:13219060 Car07g01149 Car-Chr7:6937306 1.60E-142 dispersed
Car04g01963 Car-Chr4:13612643 Car07g01149 Car-Chr7:6937306 3.09E-14 dispersed
Car07g01149 Car-Chr7:6937306 Car18g00857 Car-Chr18:9596081 2.61E-122 dispersed
Car07g01149 Car-Chr7:6937306 Car04g01486 Car-Chr4:8651086 1.02E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89009 PF00069 Pkinase 1.60E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01149 K07760 - csv:101204557 601.282