Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01160 ATGTTATGGTCAAAATCTTTGTCTGTTGTTGCAATGGTTGTGATGGATATCATGGCGATTAGGGTTAGGCCATTCACCCGAATGGAAGCGTCTGGTAGCGACCCCGATTCTCATAGAACTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCTAATATGATTCAGGCTCCGCTTTCCGCTCTGTTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCTAGTCATCAAGAATCCGAGGCATTGATAAGTGCACGATTACCTTCGGGATTGCGAGACCATCTTCGTAGTCAGATTGAAGAATCTTCTGGTGTCACTAACGACGGAGAGGTTTCGATTAGGATAATTGGAGCAGGGGAACAAGAACATGTTAGGGACAGTGCTGGACTAGCAGTTGGGCAAGTGAGGGAGGTCGGCAGTCAGAATTCAGCATCTTTGCAATCTGTTTCGGGGTTGGCATCATCAGAGTTTAGCCAGGGAGATGCTGCTACTGGACGAGGTGCGATAGAGGGTATTCCTCAACCGGTTAATGAAGGTCCTGATGGAGATGCGTCGGAGGCAGCTGGGGGAAATAGAAGGGATTCTTCTTACCAAAGGTACGATATTCAACAGGCTGCCCGGGGGATTGAGCAGATTCTTCCATTTAGTTTTCTTCTACTGGTAGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATTGCTGCTTTCATGTACAAGTCTAATGATATATTGCGAAAACAAACAGCTTTGAAGGGAGAGAGGAAGATCTCTGTTTTGGTTGCCATTTCTCTTGCATTCACTTTCCATATTATTGGTGTGTACTGGTGGTATCAGAAGGACGATCTCTTATATCCGTTGATCATGCTTCCTCCCCGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAAGCAGGGATGGTGGTCAAGTGTGTTTTATTGATGTATTACAAGAACAGTCGAGGCCGCAATTATCGTAAACAGGGACAAATGCTAACTTTAGTCGAATATCTGCTTCTACTGTACCGTGCATTGTTGCCTACTCCCGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGAAGTTTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCATTGTCGCGTAAAGAGGTGCATTATGGGGCCTATGCAACATCGGAGCAGGTCAGTGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCTTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGGACATGTCCATTGTGTAGGGCTTTGGTTAAGCCTGCGGATCTCAGGTCTTTTGGGGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAA 1485 45.05 MLWSKSLSVVAMVVMDIMAIRVRPFTRMEASGSDPDSHRTASTSGSSRRFGMLAASNMIQAPLSALLEYSGLLRGRPSHQESEALISARLPSGLRDHLRSQIEESSGVTNDGEVSIRIIGAGEQEHVRDSAGLAVGQVREVGSQNSASLQSVSGLASSEFSQGDAATGRGAIEGIPQPVNEGPDGDASEAAGGNRRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVAISLAFTFHIIGVYWWYQKDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAGMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7000942 7007540 - Carg12634-RA Car07g01160 152394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01160 494 ProSiteProfiles Zinc finger RING-type profile. 433 471 IPR001841 -
Car07g01160 494 Pfam Zinc finger, C3HC4 type (RING finger) 431 474 - -
Car07g01160 494 ProSitePatterns Zinc finger RING-type signature. 448 457 IPR017907 -
Car07g01160 494 MobiDBLite consensus disorder prediction 160 199 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00234 Car07g01160 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00089 Car-Chr4:508737 Car07g01160 Car-Chr7:7000942 1.15E-175 dispersed
Car04g00360 Car-Chr4:2034936 Car07g01160 Car-Chr7:7000942 5.68E-11 dispersed
Car04g00979 Car-Chr4:5653397 Car07g01160 Car-Chr7:7000942 0 dispersed
Car07g01160 Car-Chr7:7000942 Car16g00235 Car-Chr16:1495880 1.15E-10 dispersed
Car03g00234 Car-Chr3:3602639 Car07g01160 Car-Chr7:7000942 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01160 - K22379 csv:101205267 836.639